Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtox_3662 |
Symbol | |
ID | 8430670 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum acetoxidans DSM 771 |
Kingdom | Bacteria |
Replicon accession | NC_013216 |
Strand | - |
Start bp | 3849481 |
End bp | 3850650 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 645035889 |
Product | integrase family protein |
Protein accession | YP_003192994 |
Protein GI | 258516772 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000552191 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGGCT GGGTTGAATC TCGTGGTAAA AACAAATGGC GATTAAATGT CCCTGATGGG ACTGGCCCGG ATGGAAAACG TATCACTCAC AGAAAAGTAG TTGAAGCTAC CAGTGAGCGC GAAGCTAAAA AACTGCTGGA CGTTTTCTCT GCTGAAGTCC AAAAGGGCCA GTATATCGCA CCATCAAAAT TAACTTTCAA AGAGTTCAGT CAAAAATGGC TTGAAAGCAA AAAGGACTTA GCACCAAAAA CCTTATATCG GTATAAGGAG ATATTAAACT CCCGAATATT ACCGGCAATG GGGCACCTTA AGATTGAAGA CATTAAGCCA TTTCATATAA TGCAGTTTTA TGGCAATTTA CAAGAACCCG GTATAAGGGA GGATGGCAAA GAAGGTACAT TATCGCCAGC TACTGTCCTT TATCACCACC GACTGCTGAC CAATATATTC AATGCAGCCG TTAAATGGCA AATAATCCTT ACCAATCCCG CCCTACGTGT GGAGGCACCC AAGGCCAAAA AGCATAAGGC TACTTCCTAT GAGGAAGAAG ACACTGCAGC TTTACTCAGT GCATTGGAGG AACAGCCGCT AAAGTTCCAG GCAATTGTTT ATATTGCCCT TGGTTGTGGT CTTCGTCGCG GTGAGATCAT GGGCCTGGAA TGGAAGGACA TTGATCTCAC AAAAGGTACA CTGGAGGTAA GACAGTCCAG CCAGTACCTA CCCGGTCATG GTACGTTTGC AAAGTCACCT AAGAATGAAA GCTCAGAACG CATTATTGCC GTTCCTACAG AAACAATGTC GCTATTAAAA CAGCACAGAG TACAGCAAAA TGAGCAGCGT TTACAAGTAG GCGGCCTGTG GCAAGCCTCA GATAGACTAT TTACTACCTG GGACGGAAAA CCGATGCACC CGGACAGTAT AACAAAATGG TTTAGTGGTT TTCTAAAAAA CAACAACCTG TCTCCATTGC CTTTTCATGG TTTGCGCCAT ACTGCAGCCA GCTACATGAT TAAGGCCGGT ATCCCGCTTA AAAATATAGC CAGCCGCCTG GGTCATAGTT CACCCAACAC AACCCTAAAT ATTTATGCCC ACAGTTTTAA GTCTGTTGAT GCAGAAGCAG CCAATAAAAT GAATGATATT TTAACCACAC GAAAAAAAGG ACAGGCTTAA
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Protein sequence | MAGWVESRGK NKWRLNVPDG TGPDGKRITH RKVVEATSER EAKKLLDVFS AEVQKGQYIA PSKLTFKEFS QKWLESKKDL APKTLYRYKE ILNSRILPAM GHLKIEDIKP FHIMQFYGNL QEPGIREDGK EGTLSPATVL YHHRLLTNIF NAAVKWQIIL TNPALRVEAP KAKKHKATSY EEEDTAALLS ALEEQPLKFQ AIVYIALGCG LRRGEIMGLE WKDIDLTKGT LEVRQSSQYL PGHGTFAKSP KNESSERIIA VPTETMSLLK QHRVQQNEQR LQVGGLWQAS DRLFTTWDGK PMHPDSITKW FSGFLKNNNL SPLPFHGLRH TAASYMIKAG IPLKNIASRL GHSSPNTTLN IYAHSFKSVD AEAANKMNDI LTTRKKGQA
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