| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_3651 |
|---|
| Symbol | |
|---|
| ID | 8430659 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | - |
|---|
| Start bp | 3842132 |
|---|
| End bp | 3844537 |
|---|
| Gene Length | 2406 bp |
|---|
| Protein Length | 801 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 645035879 |
|---|
| Product | CRISPR-associated helicase Cas3 |
|---|
| Protein accession | YP_003192984 |
|---|
| Protein GI | 258516762 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1203] Predicted helicases |
|---|
| TIGRFAM ID | [TIGR01587] CRISPR-associated helicase Cas3
[TIGR01596] CRISPR-associated endonuclease Cas3-HD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTGTG CCCACATCAA CCCGTCAATC GCCAAAGAAC AAAGTGTCAA AGAACACCTG
TACAGCGTGG CTGAATTAGC CAAGGAATTC AGTTCAAAAA TTTCCCTGGC AGCGACTGGT
GAACTGATGG GGATGCTTCA CGATATGGGG AAAGGGACCC GGAAATTTGA CGCTTACATA
CGCTATTGCG CTCAAAATCC CCAGGACAAG TCTCTTAAGG GACAGGTCAA CCATTCCACA
GCGGGAGCCA AGTTGATCTA CGACAGCTTC TATAACACAG CGGATAGACT GCAAAAATTT
ACGGCTCAAC TTATTTCCCT TGCGGTCTGC TCTCATCACG GGGGCCTGAT TGATTGCTTG
GACCTTAGAG GCAGGGATAA ATACACGGAG AGAATGAAAC CAGATGAAGA CATTCTTTAT
GACGAGGCCC TGAATTACTT TAGGTCAGAA TGTTTGGAAA CAAACCAACT TAAGGACCTT
TTTGCGAAAG CGGCAGAAGA GATTAAAGCT GTGATTACTC ACATTAATCA ATTAAACAGC
TCAGCAGGCC AATGCTGGTT TGCTTACGGA GTTCTCGAAA AGTATTTGTT CAGTTGTCTT
ATTGATGCGG ACCGCTACGA TACCTATCTC TTCATGGAAA ACAAAGCCAG AAAGGAGAAG
GTCAATAAAT ACGCTTTATG GGCTGAGCTT GCCGGTATTC TGGAAGCGAA ACTAAGCAGT
TATCCTCAAG AGAGCAAAAT CAATGGGCTT AGAGCGGAAA TCTCTTTAGC CTGCAGAAAT
TTTGCGCGAA ACGGTTCTGG CGTCTATCAA CTGGCGGTAC CCACCGGCAG CGGGAAGACC
CTTTCCAGCC TGCGCTATGC CTTGAATCAT GCCCAAGAGT GTGATAAGGA CAGAATTTTC
TATATCATTC CATATACTAC CATTATTGAC CAGAATGCCA GAGAAATTAA AAATATATTA
GGCCATGAAG AAATGATTTT AGAGCATCAT TCCAATCTGA TTGTCGCTGA TGATGAGGAA
GAAGTGGTCA ACTACAAGCT GCTGACGGAA CGCTGGGACA GCCCGATTAT TCTAACCACC
ATGGTACAGT TTCTTAATAC CTTATTTAAT GGCGGAACTC AAGACGTTCG CCGATTGCAT
CACCTCGCCA ATTCTGTGAT TATCTTTGAC GAAATCCAGG CCATCCCTAT TAAATGCATA
AGTATGTTTA ACAGTGCTCT TAGTTTTCTG GCCGGTGTCT GCCAAGCAAC GATAATTCTA
TGCACCGCTA CCCAGCCTCT TCTGGAAACG ACTGAAATCC CTCTAAAGTT AAGTGAAAAT
CCGAACATCA TTTCCGATGT CTATGAGAAG TTCAGACAGT TTAAACGGGT GGATGTGATT
CCGAAGCTGG TAACCGGAGG GTATAGTGCT GCGGCTCTCA AGGATTTCAT TCTGGACAGA
ATGGATCAAT TCAACAGCTT ATTGGTGGTT TTAAATACCA AGAATTCGGC CAGGGAAGTT
TTCAACGAAT TAAAAGCGGC AAATCAGGGG CTGCCCGAAG AGAAACAGTG TCAAGTGTTT
CATTTGAGTA CTAATATGTG CCCGGCCCAC AGGCTGAAGG CTTTACAGGC CATGAAAGAA
CAGTTGGGGT GCGGGAAGGT GATCTGCGTC AGCACTCAGC TCATTGAAGC CGGTGTCAAT
ATTTCCTTTG AGTGCTTGGT CCGGTCTTTA GCCGGTTTGG ACAGTATTGC TCAGGCGGCG
GGACGCTGCA ACCGGCATGG GGAAAAGGAA CGGGGTGACG TCTATATCGT CAATCTTGAG
AGGGAAGATG TCAGCAAACT TGTAGATATT AAGAAAGGAC AGGAGTGTAC GGAGAGAGTC
CTGCGGGATT TCGAGGACAA CCCGGAGAGC TTTGATCGGG ATTTGCTCTC TCCCCAGGCC
ATGGCCAGGT ATTACAAGTA TTATTTCTAC GAGCGTAGAA CGCAGATGAA TTATAACCTG
AAAGGGGACA ATAGAGGCAA ATCATTATAC GAAGTTTTGG CCGGGAATAA GGAGGCAGCG
GAGGCCTTTC ATAGCCGCAA TGGCCGTCCG GCGGACCTGA TGCTGAAACA GGCCTTTAAG
ACGGCGGGCC AGGAATTTCA AGCTATCGAC GAAAATACAA CAGGTATTCT GGCCCCGTAT
GAAGAGGGCC GGGACCTCAT AACCCTGATC AATGGTGAAT GCAGTTTGGG CGAATTGAAA
CGATATCTGA AAAAAGCCCA GCATTACAGC GTGAATTTAT ATGAAACAGA CCGCAGAAAA
CTGGAACAAA TGAAAGGACT GGTTTGGTTA AAGGATAAAA CCATTCTTGC TCTGCGTGAG
GGATTTTATG ATGAGCAAAT GGGGGTGAAT CTTGATAGGA AACCCCTGGA TTTTTGCGGT
GTCTAA
|
|---|
| Protein sequence | MRCAHINPSI AKEQSVKEHL YSVAELAKEF SSKISLAATG ELMGMLHDMG KGTRKFDAYI
RYCAQNPQDK SLKGQVNHST AGAKLIYDSF YNTADRLQKF TAQLISLAVC SHHGGLIDCL
DLRGRDKYTE RMKPDEDILY DEALNYFRSE CLETNQLKDL FAKAAEEIKA VITHINQLNS
SAGQCWFAYG VLEKYLFSCL IDADRYDTYL FMENKARKEK VNKYALWAEL AGILEAKLSS
YPQESKINGL RAEISLACRN FARNGSGVYQ LAVPTGSGKT LSSLRYALNH AQECDKDRIF
YIIPYTTIID QNAREIKNIL GHEEMILEHH SNLIVADDEE EVVNYKLLTE RWDSPIILTT
MVQFLNTLFN GGTQDVRRLH HLANSVIIFD EIQAIPIKCI SMFNSALSFL AGVCQATIIL
CTATQPLLET TEIPLKLSEN PNIISDVYEK FRQFKRVDVI PKLVTGGYSA AALKDFILDR
MDQFNSLLVV LNTKNSAREV FNELKAANQG LPEEKQCQVF HLSTNMCPAH RLKALQAMKE
QLGCGKVICV STQLIEAGVN ISFECLVRSL AGLDSIAQAA GRCNRHGEKE RGDVYIVNLE
REDVSKLVDI KKGQECTERV LRDFEDNPES FDRDLLSPQA MARYYKYYFY ERRTQMNYNL
KGDNRGKSLY EVLAGNKEAA EAFHSRNGRP ADLMLKQAFK TAGQEFQAID ENTTGILAPY
EEGRDLITLI NGECSLGELK RYLKKAQHYS VNLYETDRRK LEQMKGLVWL KDKTILALRE
GFYDEQMGVN LDRKPLDFCG V
|
|---|
| |