Gene Dtox_3623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_3623 
Symbol 
ID8430631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp3817030 
End bp3817791 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content47% 
IMG OID645035853 
Productbeta-lactamase domain protein 
Protein accessionYP_003192958 
Protein GI258516736 
COG category[R] General function prediction only 
COG ID[COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00997339 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.648861 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATTAA CCGTATTGGG ATGCTGGGCA CCTTACCCCC GCGCCGGTGG GGCCTGTTCG 
GGTTATTTAT TGCAAGACGG GGACATAAAT ATAATGTTAG ATATTGGGCA CGGAAGTCTG
AGCAGGTTGA TGCAGGTGTT GGATTTTCGC TCTCTGACAG CTTTAGTGAT AACTCATTTT
CACCCGGATC ATTATAGCGA TGTTTATGCT TTGCGACATG CTGTGGCAGG AGCCATCAGA
GATAAATCCA GACAGGGACC GCTCACTTTG CTTATGCCTT CGGAACCGGC GGCAAACTTT
ACGGAGATTT CCGGTTATGG TGATGCTTTT GCAGTTAAAG CAATAGACAG CCTGTCCCCG
GATTCGTATA GCGGTACCGG CAATTGGCAG CTGGGCGGTT TAAAATTGCG TTTTATGCCG
ACTGTGCATA AGAAGCCTTG TTATGCTGTG CGTATTGAGG GTTTAACGCA ATTTGTTTAT
ACAGGTGATA CCGCCTATTC CAGTGAACTG GTTGATTTTT TTAGAGGGGC TGATTTGCTG
CTCAGTGAAG CCAGCGGGTT CGACAGTGAT ACTTCGATTT TGTCCGGAAG CCACATGACA
GCAAGGCAAG CAGGTGAATT AGGGAGATTA GCCGGTGCAA AAAAATTAAT GATAACCCAC
TTTTGGCCGG AATACGAGCA GGCAGACTTG TTGACACAAG CACAAGAGAG TTTTGGCAGT
AAGGTTGAAC TGGCCAGGGA AGGGCGTACA TATAAAATTT GA
 
Protein sequence
MQLTVLGCWA PYPRAGGACS GYLLQDGDIN IMLDIGHGSL SRLMQVLDFR SLTALVITHF 
HPDHYSDVYA LRHAVAGAIR DKSRQGPLTL LMPSEPAANF TEISGYGDAF AVKAIDSLSP
DSYSGTGNWQ LGGLKLRFMP TVHKKPCYAV RIEGLTQFVY TGDTAYSSEL VDFFRGADLL
LSEASGFDSD TSILSGSHMT ARQAGELGRL AGAKKLMITH FWPEYEQADL LTQAQESFGS
KVELAREGRT YKI