Gene Dtox_3616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_3616 
Symbol 
ID8430622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp3811397 
End bp3811999 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content45% 
IMG OID645035844 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003192951 
Protein GI258516729 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.154069 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.150786 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACTTTAT CTGATAATGC ATTAGTGGAA AGGAGCAAGC AAGGCGATTT AGAGGCTTTT 
GACTTGCTGG TTCGCCGCTA TGAGGTTAAA ATATACAACA TGGCCTATCG TTTTATGGGC
AATAGTGCTG ACGCCAGTGA TCTGGCCCAG GAGACTTTTA TTCGCCTGTA TAAGTCACTG
CCTACCTTCC GGGGGGATTC GGCCTTTTTA ACCTGGCTTT ACCGTATTTG TGCAAATGCT
TGTCGTGATG AATTGCGCAA ACGGAAAAGA AAGCAAGAGA TTTTCTGGGA TGAAATTAGT
TGTGGGGTAG AGTCGCAGGC TATGTACAAT AATGATCCTT TGCCGGAAGA TTTACTGGAG
CAGCGTGATC TAAAGGAGTG CCTGCAATTC TGCCTGGATA GTTTATCTGA AGAACACAGG
TTGATAATCA TATTGCGTGA AATACAGCAG CTCAGTTATG ATGAGATCGC TCGTGTTTTG
GACTGTACGA TGGGTACGGT TAAATCAAGG CTTTCCCGTG CCCGCCTGGC GCTTAAGGAA
AAAGTAATGG CTCATCCGGA ACTTTCAGGT TCGGTAAAAC GTCATAAAAA GGAAAGGGAG
TAA
 
Protein sequence
MTLSDNALVE RSKQGDLEAF DLLVRRYEVK IYNMAYRFMG NSADASDLAQ ETFIRLYKSL 
PTFRGDSAFL TWLYRICANA CRDELRKRKR KQEIFWDEIS CGVESQAMYN NDPLPEDLLE
QRDLKECLQF CLDSLSEEHR LIIILREIQQ LSYDEIARVL DCTMGTVKSR LSRARLALKE
KVMAHPELSG SVKRHKKERE