Gene Dtox_3586 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_3586 
Symbol 
ID8430592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp3789182 
End bp3789925 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content46% 
IMG OID645035814 
ProductApbE family lipoprotein 
Protein accessionYP_003192921 
Protein GI258516699 
COG category[S] Function unknown 
COG ID[COG2122] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.123 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGTCTACG AAGCAAGAAC CTACCGTAAA AACTATCGTC AATCGGATTT AGCTCATTTC 
CAGGTTATGA TCAAGGAAAC AGATTTGGAC ATTGGAGTTG AGAAAAAAAA TTATAAACCT
AAACTGGTGC AACTGGCGCA AGAAATTTCA GCTAAATACC GGCGCCAGTT AGAGGACTAT
ATAAAAACAC ACCAGGAATT TTTAACATCC TTAGAACCGG TACAGCTAAC ACCATTTGCA
CCTGCCATAG CCGTTCAAAT GGCTGCCGCC GCCAAAACCG CCGGTGTCGG GCCAATGGCT
GCGGTGGCCG GTGCTGTGGC CGAATCGGTA GGAAAGGAAT TAGCCCGCCA TTCCGATGAG
ATAATTATAG AAAACGGCGG AGATATCTAT TTACGCACCA ATAAGATAAG GAGAATCGGT
ATATTTGCCG GGACATCCCC CTTTTCGGGT AAAATTGCTA TGGAAATCCT TCCCGAACTA
AGGGAGTATG GCATTTGCAC CTCGTCGGGC ACAGTTGGCC ATTCTTTGAG TTTTGGTAAA
GCCGATGCCG CCATCATTCT CTCTGCCGAT GCAGCTTTAG CTGACGCAGT TGCTACCGCT
ACGGCAAATC TGATACAGGA GCCGGATGAT TTACATAATG CACTGGAATT TGCCACTGCC
ATACCTGGTA TTGTCGGAGT AGTTGCAATT AAGGCTGATA AACTGGCAGT CTGGGGAAAA
ATTATAAAAA TTGTTTCCGC CTAA
 
Protein sequence
MVYEARTYRK NYRQSDLAHF QVMIKETDLD IGVEKKNYKP KLVQLAQEIS AKYRRQLEDY 
IKTHQEFLTS LEPVQLTPFA PAIAVQMAAA AKTAGVGPMA AVAGAVAESV GKELARHSDE
IIIENGGDIY LRTNKIRRIG IFAGTSPFSG KIAMEILPEL REYGICTSSG TVGHSLSFGK
ADAAIILSAD AALADAVATA TANLIQEPDD LHNALEFATA IPGIVGVVAI KADKLAVWGK
IIKIVSA