| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_3570 |
|---|
| Symbol | |
|---|
| ID | 8430576 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | + |
|---|
| Start bp | 3769017 |
|---|
| End bp | 3770537 |
|---|
| Gene Length | 1521 bp |
|---|
| Protein Length | 506 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 645035798 |
|---|
| Product | extracellular solute-binding protein family 5 |
|---|
| Protein accession | YP_003192905 |
|---|
| Protein GI | 258516683 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGCTT TAGGCTTTTT TTCCTGGAAT CTAAAGCTAG GCGGCATACC TGTGCTCAGT
CTCCTGGACT CGCATCAAAC AGTTGTCTAT GCTTACACCT CAGAAGCTCA GACACTGGAC
CCGGCACTGG CCAAAGATCC TCAATCAGCC AAGCTAATTA GCTGTATATA TGAAGGACTG
GTACGTTATA AACCTGGAAC TCTCGATATT GAACCTGCGT TAGCTTCAGA TTGGAAAATA
TCTAAAGACG GCCTTACCTA CACTTTTAAT CTTAAAAAAA ATATTTTATT CCACGACGGT
ACACCTTTTA GGGCCCAGGC TGTTAAATAC AGTATTGAGC GTCAAACTAA AAAGGGAATA
GCAAGCTATT ATTACGATCT GGTTTTCGGG CCCTTAAGGG AGGTAAAGGT AATTGATGAT
TATACGGTAA AGCTGGTCCT TTCTAAACCC TATGCTCCAC TCCTGCGGAA TCTGGCTATG
CCCTATGCCG CTCCCGTTGT TTCACCTTCG GCAGCAGAGA AATATGGTTC GGCCTTTGGA
GTCAATCCTA CGGGCACTGG ACCCTACATC TTACTGGATT GGGATAAAGA TATTTCGATC
AGCCTGGCAG TTAACCCGTT TTATCGCGAA CCGGGACCCG AAGTTAAAAA GCTTATATTT
AAGGTGATAC CACAAACTGG CCAGCGTCTA ACAGCGCTAT TAAATGGTGA TGTCCACCTG
GCAGACGGTT TTACACAGCT AAATACCTTG TTATTCAAGC AAAGGAATAT ACCTTACCAG
ACTACTGTCA GCAATGATGT TAGCTACCTG GGTTTTTACG TTAACAAGCC ACCCTTTAAT
AATATTAAAC TTCGCCGTGC AATAAGCATG GCTATTAACC GCGGTGAAAA AGGAGATACC
GGCCAATTAG CAATAAATAA TGAAAACATT TTACCTCCCG GCGTTTGTGG TTTTGAGAAA
AACTTTAAAC TATACGGCTA TGACCCTGAA AAATCAATTC AGATACTTAA TGACACAGTT
GGCAATGGCT TTTCCTTTGA GCTGATTACT TATCTGGATC AAAGACCTTA TAACGACACA
GGCGGTGAGC CACTGGCCAA ATTTATCCAA GATCAGTTGG CACAGGTAAA TATAAAAGTT
AGAATAAAAA CATACAATTG GGAAAAGTAC AAGAGAGCAC TGCTTAACCA GGAGGGTGAT
GCTTTCCTGT ACGGATGGAT TAGTGACAGC GGAGACCCAG ATGATTTTTT ATACCATCAA
TTCGGCGGTA AACTAAATGA GAGCGGTTTA AACATCTTCC ACTATAATAA TGAAGCTGTT
AATTCGCTGC TGGAGGAAGG ACGTTCTTCT TGCGATTTAG AGCAAAGACA GAATATTTAT
GCCAGAGTAC AAAGACTTAT CTTATCAGAC GCCCCCCTTG TACCCCTTAA TCACGGCATT
AATATTTTAG CTGTGTCACC TGTAATTAAA AATTGTATAT TACAAAGAAA CGGTACCTGT
TTTTTAAACA GACTCAACTA A
|
|---|
| Protein sequence | MFALGFFSWN LKLGGIPVLS LLDSHQTVVY AYTSEAQTLD PALAKDPQSA KLISCIYEGL
VRYKPGTLDI EPALASDWKI SKDGLTYTFN LKKNILFHDG TPFRAQAVKY SIERQTKKGI
ASYYYDLVFG PLREVKVIDD YTVKLVLSKP YAPLLRNLAM PYAAPVVSPS AAEKYGSAFG
VNPTGTGPYI LLDWDKDISI SLAVNPFYRE PGPEVKKLIF KVIPQTGQRL TALLNGDVHL
ADGFTQLNTL LFKQRNIPYQ TTVSNDVSYL GFYVNKPPFN NIKLRRAISM AINRGEKGDT
GQLAINNENI LPPGVCGFEK NFKLYGYDPE KSIQILNDTV GNGFSFELIT YLDQRPYNDT
GGEPLAKFIQ DQLAQVNIKV RIKTYNWEKY KRALLNQEGD AFLYGWISDS GDPDDFLYHQ
FGGKLNESGL NIFHYNNEAV NSLLEEGRSS CDLEQRQNIY ARVQRLILSD APLVPLNHGI
NILAVSPVIK NCILQRNGTC FLNRLN
|
|---|
| |