| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_3567 |
|---|
| Symbol | |
|---|
| ID | 8430573 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | - |
|---|
| Start bp | 3766771 |
|---|
| End bp | 3767598 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 645035795 |
|---|
| Product | spermidine synthase |
|---|
| Protein accession | YP_003192902 |
|---|
| Protein GI | 258516680 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0421] Spermidine synthase |
|---|
| TIGRFAM ID | [TIGR00417] spermidine synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGAATTTT GGTTTACTGA AGATCAAAGC AAAGATTTAA GGATTGGCTG CCGCATACTG
GAGACTATAC ACAGTGAAAC AACTCCTTTT CAAAAACTGG CGGTTATTAA TACGGCTCAA
TTCGGGCGCA TGCTGGTGCT GGACAATGTA ATACAAACTA CTGTCAAGGA TGAATTTGTT
TATCATGAGA TGATTGCGCA TGTAGCCTTA AATACCCACC CCAACCCCAA GAAAGTGCTG
ATCATCGGTG GCGGTGACGG TGGTGTGGTT CGTGAAGTGG TTAAACATAC GGGTGTGGAG
AAAGTGGTGC ATGTGGAGAT AGACGGCAGG GTTATCGAAG TGTCTAAAAA GTACCTTCCG
GAAATCAGTT GCGCTTTGGA TAACCCGAGG GTTGAGGTTA TTATTGATGA CGGAATTAAG
CATGTGCAGG AATATAAAGA TACCTATGAT GTAATTATTA TTGATTCTAC TGACCCGGTA
GGCCCGGCAG TAGGACTTTT TAGCGCGGAG TTTTACCGGT CTGTCTCTGA GGCATTAACG
CAGGACGGAT TATTTGTGGC GCAGACAGAG TCCCCCTTTT ATAACGAGGA ACTAATCACC
AGGATACAAA AAGATGTGGC AGACATCTTT CCGGTAACAA GCCTGTACCT GGCATGCGTT
CCTACCTATC CTGGCGGTTT GTGGAGCTTT ACTATAGGTT CAAAGATATA TGACCCTCAA
AAAGCAGATA CAACCAGGTT TTCTGAGCTT GCCACCAGGT ATTATTCGCC TGTGGTGCAT
AAGGCAAGTT TTGTATTGCC CCCTTTTGTT CAAAACCTAT TGAAATAA
|
|---|
| Protein sequence | MEFWFTEDQS KDLRIGCRIL ETIHSETTPF QKLAVINTAQ FGRMLVLDNV IQTTVKDEFV
YHEMIAHVAL NTHPNPKKVL IIGGGDGGVV REVVKHTGVE KVVHVEIDGR VIEVSKKYLP
EISCALDNPR VEVIIDDGIK HVQEYKDTYD VIIIDSTDPV GPAVGLFSAE FYRSVSEALT
QDGLFVAQTE SPFYNEELIT RIQKDVADIF PVTSLYLACV PTYPGGLWSF TIGSKIYDPQ
KADTTRFSEL ATRYYSPVVH KASFVLPPFV QNLLK
|
|---|
| |