Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtox_3560 |
Symbol | |
ID | 8430562 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum acetoxidans DSM 771 |
Kingdom | Bacteria |
Replicon accession | NC_013216 |
Strand | + |
Start bp | 3759766 |
End bp | 3761106 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 645035784 |
Product | Peptidoglycan-binding LysM |
Protein accession | YP_003192895 |
Protein GI | 258516673 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1388] FOG: LysM repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTATAA AAAATAAACT CAAAAAAAGT GCTGCAGGGA CTTTAGCCGG TATTTCACTA TTCATTTGCA GTACCGCCGG ACTGGCTGCA ACAAATTATC CGACTTATAA TGCTATAAGC GGAGATACCC TATGGATAAT GTCCAATAAA TTATATACGT CCAGTGACAA AATTGCTTCT GTGAACAGCA TTAATTCCGA TTCTATTATG GCAGGCCAAA GACTGGTAAT ACCCCAAAGT AATATTTATA AAGTAGTATC GGGTGATACT CCTTACTTAA TAGCTAAGAG ATTTGGCATA TCACTGCAGG TTTTTTTAAC TGCGAACAAC ATGACATCCT CAGACGTGCT CTATCCCGGA CAGCAAGTAA ATCTACCGGG AATTCTTGCA TACAAGGTTG CCAATAAGGA TACCCTAAGC CTCCTGGCCA CACAATTCGG AACAACCATT AATCAACTTA CTAAAATCAA TAACTTAACT GATACCAATA TTATTACAGA TCAAAAAATA TATATACCGG TGGCTGAAAC CAAACAATAC ACTGTTCAAT CAGGAGACAG CCTTTATCTA ATAGCTCAAA AATACAACTT ATCAGTCAGT GATCTAACTA ATGTTAATTG GCTTAGTTCT ACAAACCTGA AAGCAGGGCA AATACTCATA ATTCCAGGTA AAACGTCGAC AACAACGTCA GCAGCAACAA GCAGCAGCGG CCAATCGCAG GCAACACTGT GGAATATCCC TTCCGGTGCC TTGCTTTATC ATGTTCAGGA AGGAGACAAC CAGTGGAGTA TCGCCCAAAA ATATAATACC ACTACGGAAG CCATTAACAA AACAAATAAT ATTAAAATTG ATCTCATACT TCCTGAACAG GCACTTTTTG TACCTAAAAA CTCCACACAA CCTATATATG GTATTAAGTG CCCTTCTGTA AAAGCTAAAA CAGGTTACGG GGAACTTTTG GATTGGGAAT ATGTCAACTG GTTTTTCAAC CCGGGAAGCA CAGCTGTAAT TGAGGATTTA CAAACCGGTA TAAAATTTAA GGCCCACCGG ATCGGCGGCT CCAACCACGC TGATTGCGAA CCCTTAAGCG CTGATGATAC CGCGATTATG AAAGGAATAT TTGGCGGTCA GTGGAACTGG TCAACCAGAC CTGTGCTGGT TCGTTTTGAA GGAAGGGTCT TGGCCGCATC TATGGCCGGC ATGCCGCATT CCTTTGACAC CCTTAGCAAT AACGCTTTTT ACGGTATGTT TGATCTTCAC TTTTTAAACA GCCGCACCCA CAACACAAAT ACAATCGACC CCGATCACCA GGCATCAGTG CGAAAAGCTG CCGGTTATTA A
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Protein sequence | MSIKNKLKKS AAGTLAGISL FICSTAGLAA TNYPTYNAIS GDTLWIMSNK LYTSSDKIAS VNSINSDSIM AGQRLVIPQS NIYKVVSGDT PYLIAKRFGI SLQVFLTANN MTSSDVLYPG QQVNLPGILA YKVANKDTLS LLATQFGTTI NQLTKINNLT DTNIITDQKI YIPVAETKQY TVQSGDSLYL IAQKYNLSVS DLTNVNWLSS TNLKAGQILI IPGKTSTTTS AATSSSGQSQ ATLWNIPSGA LLYHVQEGDN QWSIAQKYNT TTEAINKTNN IKIDLILPEQ ALFVPKNSTQ PIYGIKCPSV KAKTGYGELL DWEYVNWFFN PGSTAVIEDL QTGIKFKAHR IGGSNHADCE PLSADDTAIM KGIFGGQWNW STRPVLVRFE GRVLAASMAG MPHSFDTLSN NAFYGMFDLH FLNSRTHNTN TIDPDHQASV RKAAGY
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