Gene Dtox_3522 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_3522 
Symbol 
ID8430517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp3726112 
End bp3726984 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content43% 
IMG OID645035744 
ProductSCP-like extracellular 
Protein accessionYP_003192862 
Protein GI258516640 
COG category[S] Function unknown 
COG ID[COG2340] Uncharacterized protein with SCP/PR1 domains 
TIGRFAM ID[TIGR02909] uncharacterized protein, YkwD family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.490521 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAACC GCAAACTGGC ATTAATACTG GTATTGGGAC TTCTGGTTAC CTCCCTGTTT 
GGCTTTGCCG GAACAAGTTT TGCCGGGTGG AATATAAATG TTACTACTTA TGTCCAGCCG
GGAGATACTT TAAAGCTGAT TTCCGACAGA TACGGAGTTA GTGTAGATGA ATTGATACAG
GCCAATAATT TGAAATCCAC AATGATTTAT GCGGGCCAGC CCATAGTTAT TGCGCATAAA
ACCGCGACCC AATCGGAGCA AACTGTTAGT TATCAAAAAT ATACTGTGAA GTCAGGGGAT
ACTCTTTATA TAATAGCCAA AAAGTTAGGC ACTACTGTAA ATAAACTGGT CAGTATTAAT
AACTTAAAGA CGTACAGCCT GAATGTAGGA CAAGTCCTGT ATGTTCCGGC TGGAGCAGCT
AACCAGGCTG TTCAGGTTCC TTCGCAGGCG CAGCCAGCTG CTCCAACGAA TACAACCGCC
ACCGTAAACG GTATGACAGC GGACGAGCAG CAAATGTTGT CATTGGTTAA CCAGGAGAGA
GCCAAGGCCG GGTTGAAGGC GTTGCAAGCT GATATGAATA TCGTTAAAGT TGCTCGCTTG
AAAGCTAAAG ACATGATTAA TCTGAATTAC TTTGACCATA ATTCGCCAAC CTACGGTTCA
CCTTTTGATA TGATGAAACA GTTTGGCATT TCCTATGGTT ATGCAGGGGA AAACCTGGCC
GGTGCGTCTA CTGTGCAGAG CGCTCATACA AATTTAATGA ACTCTTCCGG ACACAGGGCC
AATATTTTAG GTGCAAATTA TAATAAGGTT GGTATCGGTA TAGTGGACGG TGGAAAATAC
GGTAAGATGT TTGTTCAGAT GTTTACTGAT TAA
 
Protein sequence
MKNRKLALIL VLGLLVTSLF GFAGTSFAGW NINVTTYVQP GDTLKLISDR YGVSVDELIQ 
ANNLKSTMIY AGQPIVIAHK TATQSEQTVS YQKYTVKSGD TLYIIAKKLG TTVNKLVSIN
NLKTYSLNVG QVLYVPAGAA NQAVQVPSQA QPAAPTNTTA TVNGMTADEQ QMLSLVNQER
AKAGLKALQA DMNIVKVARL KAKDMINLNY FDHNSPTYGS PFDMMKQFGI SYGYAGENLA
GASTVQSAHT NLMNSSGHRA NILGANYNKV GIGIVDGGKY GKMFVQMFTD