Gene Dtox_3507 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_3507 
Symbol 
ID8430502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp3713225 
End bp3715906 
Gene Length2682 bp 
Protein Length893 aa 
Translation table11 
GC content46% 
IMG OID645035731 
Productformate dehydrogenase, alpha subunit 
Protein accessionYP_003192849 
Protein GI258516627 
COG category[R] General function prediction only 
COG ID[COG3383] Uncharacterized anaerobic dehydrogenase 
TIGRFAM ID[TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCTTCTG TAACTTTAAC TATTAATGGT CAACAAGTGA CTGTTCCCAA AGGAACCTCT 
GTGTTGTATG CTGCCAGAAA AATAGGCGTT GATATTCCCA CCCTTTGTCA TGATCAGGAA
CTCACCAGAT TTGGAGCCTG CCGTATATGT GTTGTGGAAA TTCCGGGCAT GCGTAACCTG
CCGGCTTCTT GTGTTACCGA AGCGACGGAC GGAATGGTGG TTTTTACCGA ATCCGAAGCT
GTGGTAGAAG CTCGTAAAAC AATTCTTGAA CTGATGCTGG CCAATCATCC AATAGATTGC
CTGATATGTA GTAAAAACGG TGCCTGCAGC CTGCAGAATT ATGCTTACCG TTACGATGTT
CAGGGAAATG CCTTTCCCGG AGAAAAACAC AATTATCCTA TCGAAAATGA AAACCCCTTT
ATTGTTAGAG ACATGAATAA ATGTATTCTT TGCGGCAAGT GCGTCCGGGC TTGTGCGGAA
ATACAAGGCC GCAGTGTGAT TGATTTTGCT TATCGAGGCT TTGATGCTAA AGTAAGCCCG
GCCATGGATT TGCCTTTAGG AGAATCGGAA TGCGTTTTTT GCGGCAGTTG TGTTGCTGTT
TGCCCGGTGG GTGCTTTGAG TGAAAAGGCT ATGTTGGGTA AAGGACGTAC CTGGGAAGTT
AAAAAGGTTC GCACTACCTG CCCCTTCTGC GGTGTAGGCT GCAATTATGA CTTGAACGTC
AAGGACGGAA AAGTAATCGG TGTTACCTCC AACCCGGACA GTCCGGTTAA CGGGCGCCAT
ACGTGCATAA AAGGACGTTT TGGAACAGAT TATATTCACA GCCCGCAGCG TTTAACCAGG
CCTTTGATTA AGAAAAACGG TGAATTTGTT GAAGCCACCT GGGATGAGGC TTTGGATCTG
GTGGCAGCCA AATTAGGTGA AATAAAAGAT AAATACGGCA GTGATGCCAT TGCCGCACTT
TCTTCAGCAC GCTGCACCAA TGAAGATAAT TATGTGCTGC AAAAATTCAT CCGTGCCCGC
ATAGGCACCA ATAATGTCGA TCACTGTGCA CGCACTTGCC ATGCCTCGAC TGTGGCCGGT
TTGGCTATAA GTTTTGGAAG TGGTGCAATG ACCAACTCTT TTAATGATAT CTTAACAACT
GATTTATTGT TTGTTATCGG TGCTAATGCT ACTGAAGCAC ACCCGATAGC CGGTGCTAAA
ATGCTTCAGG CTGTGCAGAA AGGTACTAAA TTAGTGGTGG CTGATCCCCG CAGAATTGAA
CTGGCGGAGA GAGCCGATTA CTGGTTGCAG CACAAACCTG GTACAGATAT CCCGTTGATG
AATGGGTTAA TGCATATTAT TATTAAAGAA GATCTTTATG ATAAAAGATT CGTGGAAGAA
CGCACTGAGG GTTTTGAAGA ACTTAAGGCA ACAGTAGAAA AATACCCGCC GGAAAAAGTC
TCAGAAATCA CCGGTGTTCC GGCAGAGATC TTATATGATG TGGCGAGACT TTATGCCACT
TCTCATAATG CGCTGATTTG CTACACACTG GGTATTACTG AGCATGTGTG CGGTGTGGAC
AATGTTATGA GTACTGCCAA TATGGCTATG CTGACAGGTC ATATCGGCAG GGCAGGTTCG
GGTGTGAATC CGCAGCGTGG TCAGAATAAT GTGCAGGGTG CCTGTGATAT GGGGGCATTG
CCCAATGTGT ATCCAGGGTA TCAACAAGTG GTTAGTCCGG AGGCACAGGC TAAGTTTGAG
AAGGCATGGG GAGTTAAGCT GTCCGGCAAA CTTGGTTTAA TGATTCCGGA TATTATGGAT
TCCGCTGTTG AAGGCAAAAT AAAGGCTATG TATATAATGG GAGAAGATCC GGTGCTAACA
GATCCTGATG CGCACCATAT TCACAAAGCT ATGAATAATC TTGAATTCTT AGTGGTGCAG
GAAATTTTTA TGTCAGAAAC GGCTAAATAT GCTGATGTAA TACTCCCGGG GGCAAGTTTT
GCGGAGAAGG ACGGTACCTT CACTAACTCT GAGAGAAGAG TGCAGAGGGT TCGTAAGGCT
ATCGAGCCTA TTGCGGATTC TAAAGCTGAC TGGGAAATCG TTTGTTCTGT CAGCAACCGT
ATGGGTTATC CCATGAATTA CAGTTGGCCC GGAGAAATAT TTGATGAAAT GGCTGCTTTA
ACTCCCTCAT ATGGCGGGAT GAATTATGAC AGAATTGATG CAAAAGGCTT GCAATGGCCC
TGCCCGACGC TGGATCACCC GGGAACGCCG ATACTGCATA CTCAGAGCTT CACCAGAGGC
AAAGGGTTGT TAAAGGGCAT CGAACATGTG CCTCCGGCAG AACTGCCTGA CGCTGAATAC
CCGTATCTGT TGTCGACCGG CCGCATTTTA TACCACTATA ATGTTACGAC TCGTCATTCG
AAAGGTTTGG GCACTCACAG ACCTGAAGAA ATGGCTCAAG TTAACCCAAT TGATGCCTGC
GTTCTGGGGG TTAATACCGG TGATAAAGTG GAAGTTGCAT CACGCCGCGG TTCTCTTACA
ACTAAGATAG CAGTAACCGA TAAAGTACCG CCGGGAATGA TCTGGATGAG CTTTCACCAT
GCGGAGACTC CTACTAACCA GCTTACTGTT AATGCTTTTG ACCCGGTTAG CAAGACTGGT
GAATATAAGA TAGCTGCTGT TAAACTGGAA AAAGCTGAAT AA
 
Protein sequence
MSSVTLTING QQVTVPKGTS VLYAARKIGV DIPTLCHDQE LTRFGACRIC VVEIPGMRNL 
PASCVTEATD GMVVFTESEA VVEARKTILE LMLANHPIDC LICSKNGACS LQNYAYRYDV
QGNAFPGEKH NYPIENENPF IVRDMNKCIL CGKCVRACAE IQGRSVIDFA YRGFDAKVSP
AMDLPLGESE CVFCGSCVAV CPVGALSEKA MLGKGRTWEV KKVRTTCPFC GVGCNYDLNV
KDGKVIGVTS NPDSPVNGRH TCIKGRFGTD YIHSPQRLTR PLIKKNGEFV EATWDEALDL
VAAKLGEIKD KYGSDAIAAL SSARCTNEDN YVLQKFIRAR IGTNNVDHCA RTCHASTVAG
LAISFGSGAM TNSFNDILTT DLLFVIGANA TEAHPIAGAK MLQAVQKGTK LVVADPRRIE
LAERADYWLQ HKPGTDIPLM NGLMHIIIKE DLYDKRFVEE RTEGFEELKA TVEKYPPEKV
SEITGVPAEI LYDVARLYAT SHNALICYTL GITEHVCGVD NVMSTANMAM LTGHIGRAGS
GVNPQRGQNN VQGACDMGAL PNVYPGYQQV VSPEAQAKFE KAWGVKLSGK LGLMIPDIMD
SAVEGKIKAM YIMGEDPVLT DPDAHHIHKA MNNLEFLVVQ EIFMSETAKY ADVILPGASF
AEKDGTFTNS ERRVQRVRKA IEPIADSKAD WEIVCSVSNR MGYPMNYSWP GEIFDEMAAL
TPSYGGMNYD RIDAKGLQWP CPTLDHPGTP ILHTQSFTRG KGLLKGIEHV PPAELPDAEY
PYLLSTGRIL YHYNVTTRHS KGLGTHRPEE MAQVNPIDAC VLGVNTGDKV EVASRRGSLT
TKIAVTDKVP PGMIWMSFHH AETPTNQLTV NAFDPVSKTG EYKIAAVKLE KAE