Gene Dtox_3446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_3446 
Symbol 
ID8430440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp3645692 
End bp3646333 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content44% 
IMG OID645035673 
ProductABC transporter related 
Protein accessionYP_003192792 
Protein GI258516570 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTGACA TTATGTTGGA AGCATCTATT CAAAAAAAAT TATGGCATTT CACTCTGGAT 
TTTAATTTAA GAGTCGGAAA AGAAATAATG GTTCTTCAGG GGCCATCCGG TGCCGGAAAA
ACTACCATTC TGCACTGTCT GGCCGGCTTG CTTAAACCTA CCTCCGGATA TATCAAGCTA
AACGACCAAC TATTCTATTC CTCCAAAGAA AAAATCTGCC TGCCGCCACA GCTGAGAAAT
ACAGGATACT TATTTCAGGA TTACGCTCTT TTCCCCCATA TGACTGTCAG ACAAAATGTT
TTATATGGCT TAAAGTGCAG AAAAGAGCGG GATATAACCG TAAATCCGGT TGATTACCTG
AACTCTTTTG GTGTCGGTCA TTTAATTGAT CGTTATCCGC GACAGCTTTC CGGCGGAGAA
AAACAGCGAG TAGCACTGGC CAGGGCATTG GCCGTGCAGC CAAAATTGCT TTTGCTGGAT
GAACCCTTTA GCGCTCTGGA TAAGAACACC AGGGAATCCC TGCGGTATGA GATGAAAAAC
CTGCACAGGG AGTGGCAAAT ACCTTTCATT CTGGTTACAC ATGATGAGGA AGACGCACGA
TGCCTAGGAG ACCAAATCAT TACACTCAAA AAAGCCGCCT AA
 
Protein sequence
MGDIMLEASI QKKLWHFTLD FNLRVGKEIM VLQGPSGAGK TTILHCLAGL LKPTSGYIKL 
NDQLFYSSKE KICLPPQLRN TGYLFQDYAL FPHMTVRQNV LYGLKCRKER DITVNPVDYL
NSFGVGHLID RYPRQLSGGE KQRVALARAL AVQPKLLLLD EPFSALDKNT RESLRYEMKN
LHREWQIPFI LVTHDEEDAR CLGDQIITLK KAA