Gene Dtox_3428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_3428 
Symbol 
ID8430422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp3627671 
End bp3628330 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content37% 
IMG OID645035655 
ProductAccessory gene regulator B 
Protein accessionYP_003192774 
Protein GI258516552 
COG category[K] Transcription
[O] Posttranslational modification, protein turnover, chaperones
[T] Signal transduction mechanisms 
COG ID[COG4512] Membrane protein putatively involved in post-translational modification of the autoinducing quorum-sensing peptide 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTATT TAAAATTAAG CAAAACCTGG GCCGGTTATC TTGGAAGAAA GACGGAACTC 
TCCAGAGAGA AGGAGATTAT CCTAACATAT ATAATTGAAT TGTTAGTTAT TACTATTGTA
TGTATAGTCT GTAGTCTTCT TTTAGGACAG CTGCTTGGTG TGTTGCCGGG AACTGCTTCC
TGCCTGTTCA TGATTGCTTT ATTCAGGCAT ACTGCTGGTG GTGCTCATTC CAATAATCCC
TGGCGATGTG CTGTTGTAAC CATACTTATC TTTCCTCTAA TAGCTTTACT GGCCGATATT
CTTTCTTCAT TTGCACTTAT TTATACAGAT GTTTTCTCAA TCATAGCAAT TTTAGTTGGC
GTAGTTACAA TAGCTAGACT GGCTCCGGTT GATTCTCCCG CTGCACCAAT AATTTCTCCT
ACTAGGAGAA AAAAATTAAA AACTTCTTCT ATTGCTATAA TTCTAATGGC AACAATTGCA
GTAGTTGTTC TGCGACAAAG TAGCTGGACT TATGCAGGGG AAATACAGAT TAGTTTAGTT
ATTGGTATTT TATGGGTTTC CCTGATTTTG AGCAAACTAG GGCATAATTT ATTTTTTTGG
ATAGATCGAA CGTTTTCAAT GGAGAAGGAG GTGAAAGAAG ATGAAAAAAT TATTACCTAA
 
Protein sequence
MSYLKLSKTW AGYLGRKTEL SREKEIILTY IIELLVITIV CIVCSLLLGQ LLGVLPGTAS 
CLFMIALFRH TAGGAHSNNP WRCAVVTILI FPLIALLADI LSSFALIYTD VFSIIAILVG
VVTIARLAPV DSPAAPIISP TRRKKLKTSS IAIILMATIA VVVLRQSSWT YAGEIQISLV
IGILWVSLIL SKLGHNLFFW IDRTFSMEKE VKEDEKIIT