Gene Dtox_3357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_3357 
Symbol 
ID8430351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp3563541 
End bp3564167 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content45% 
IMG OID645035591 
Productcell wall hydrolase SleB 
Protein accessionYP_003192710 
Protein GI258516488 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3773] Cell wall hydrolyses involved in spore germination 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.17779 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTTTT TTTTCCGGAT ACGAGTAATA TTATTAGCTT TGTGTATTAC CGTAATACTG 
CCGTCAGCAG CATTTGCCGC TACCCACACA GTGAGCAGAG GAGAAAGCCT TTACCAAATA
AGCAGTTGGT ACGGAACAAC TGTTGATACT GTAAAAGCGG CTAACGGTCT CAAGGATAAC
GCAATTTATC CAGGCCAAAA GCTTTATATT CCGGACAACT CGCGGAAAAG CAGTTCAACT
GTGAGCAGGG GTATGGGCAA CATCAGCAGG TCTGATATTG ACCTTTTAGC CCGCATAATC
CACTCAGAAG CTGAAGGTGA GCAGTACAAA GCTAAAGTTG CGGTCGGTGC AGTAATACTG
AACAGGGTAA GCAGCCCGAT TTTCCCTAAC AGTATTGCAG GTGTTATCTA TCAGGTCACA
GACGGCCATT ACCAGTTTGA GCCGGTACTA AACGGGAGAA TCAACTACCC GGCCAATGCT
GATTCTGTCA AAGCAGCACA AGATGCCCTG AACGGCTGGG ATCCGACCAA CGGTGCGCTA
TACTTCTTCA ACAATGATGT GACCAACAGT TACTTGTGGG CTAAGAAGAT AAGTATAGTG
TTGGGTAAAT TAGTATTTTC TTTTTAA
 
Protein sequence
MDFFFRIRVI LLALCITVIL PSAAFAATHT VSRGESLYQI SSWYGTTVDT VKAANGLKDN 
AIYPGQKLYI PDNSRKSSST VSRGMGNISR SDIDLLARII HSEAEGEQYK AKVAVGAVIL
NRVSSPIFPN SIAGVIYQVT DGHYQFEPVL NGRINYPANA DSVKAAQDAL NGWDPTNGAL
YFFNNDVTNS YLWAKKISIV LGKLVFSF