| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_3324 |
|---|
| Symbol | |
|---|
| ID | 8430318 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | + |
|---|
| Start bp | 3525466 |
|---|
| End bp | 3526806 |
|---|
| Gene Length | 1341 bp |
|---|
| Protein Length | 446 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 645035559 |
|---|
| Product | DEAD/DEAH box helicase domain protein |
|---|
| Protein accession | YP_003192678 |
|---|
| Protein GI | 258516456 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAAAAA AGAGGTGTCT TAATGTGTCC AAGGATTTTT TACTGCTGGG CATTCGGCGT
AAAATAAATG ACTTTTTAAG AGAAAACGGG ATTACAGAGC CAACTCCCAT ACAAGTTCAG
GCCATACCTG TTTTAATGAC GGGAAAGGAT TTATTGGCTC AGTCTCAGAC CGGCACCGGC
AAGACTCTGG CTTTTTTGCT GCCGGTTTTA GAAAAAATTG AAGTAAATAA ACCACAGGTA
CAGTCCTTGA TTATTACTCC CACCAGAGAG CTGGCTCTGC AAATTACCGG TGAAGCCAAA
AATCTTGGTG ACAAGCTGGG TATAAATATT CTGTCTGTCT ACGGAGGCCA GGATGTAGAA
CGGCAAATTA AAAAATTAAA GGGCCACATA CATATGGTTA TCGGGACACC GGGCCGGCTG
CTGGATCATA TCCGTCGCAA GACCATCTCC TTGTCCGGAG TTTCCAAACT TGTACTGGAT
GAAGCCGATC AGATGCTGCA CATGGGCTTT CTGGAAGATG TGGAGGAAAT CATCCGCAAA
TCACCGGTCA AAAAACAGAC CATGCTCTTT TCGGCCACCC TGCCGCCCAG GATTCGCGCT
CTGGCCGCAC GTTATATGCG TAAACCGGCA GATATTCGCA TACAGAGCCG GCAGGTTATA
TTAGACAAAA TCAAACAGAT TGTCATTGAA CTGGAAGAGA AAGAAAAGCT GACTCAACTC
TGCCGCCTGA TCGATGAAAA CCAGCCTTAC CTGGCTATTA TATTCTGTCA TACCCGGCAG
CGTGCCAGCG AACTGGCCGC TGCACTGATT CAGCGAGGCT ATGCGGCGGA TGAACTGCAC
GGAGATTTAT CTCAGGCCAA GCGGCAGCAG GTTATGAAGC GTTTCAGCTC GGCCCGGCTG
CAGCTGTTGG TTGCCACTGA CATTGCCGCG CGGGGACTGG ATATTGAGGG TGTCACACAT
GTTTACAGCT ACGATATTTC ACATTATTTA GAAAGCTATA TCCATCGTAT CGGGCGAACC
GGGCGGGCAG GAGAATCAGG AACAGCAGTT ACCTTTGTCC TGCCCGGAGA GCACAGGTAC
CTGCGCATAA TTGAGCAGGG TACCGGCGCA GCCATAGAAA AATACACTGC CGACGGTCAA
AAACTTATAA AAACCAGTAA GAGAAGCCCG GCCAGAGCGG GTTCCGGAGC GGGCAAATTA
AAACCGGCTG CGGGTGAAAA GAAATCTCCT CAGACTGGAG CAGCGGCGGT AAAAACAAAG
AACCGGCGCC AACCGGGAGT AGCCGGAAAA GCTGCCTTTA AAAAGAAAGC CGCCGATAAA
CGCCGTAAAA AAGTATTATA A
|
|---|
| Protein sequence | MIKKRCLNVS KDFLLLGIRR KINDFLRENG ITEPTPIQVQ AIPVLMTGKD LLAQSQTGTG
KTLAFLLPVL EKIEVNKPQV QSLIITPTRE LALQITGEAK NLGDKLGINI LSVYGGQDVE
RQIKKLKGHI HMVIGTPGRL LDHIRRKTIS LSGVSKLVLD EADQMLHMGF LEDVEEIIRK
SPVKKQTMLF SATLPPRIRA LAARYMRKPA DIRIQSRQVI LDKIKQIVIE LEEKEKLTQL
CRLIDENQPY LAIIFCHTRQ RASELAAALI QRGYAADELH GDLSQAKRQQ VMKRFSSARL
QLLVATDIAA RGLDIEGVTH VYSYDISHYL ESYIHRIGRT GRAGESGTAV TFVLPGEHRY
LRIIEQGTGA AIEKYTADGQ KLIKTSKRSP ARAGSGAGKL KPAAGEKKSP QTGAAAVKTK
NRRQPGVAGK AAFKKKAADK RRKKVL
|
|---|
| |