Gene Dtox_3269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_3269 
Symbol 
ID8430263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp3466195 
End bp3466866 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content34% 
IMG OID645035507 
Productlipopolysaccharide biosynthesis protein 
Protein accessionYP_003192626 
Protein GI258516404 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3944] Capsular polysaccharide biosynthesis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.316861 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAACTAG AAATAAAGGA TATTATTAGG ATATTGAAAA AGGGGAAACT ATTATTGTTA 
ATACTGCCCT TTATCGCGGT GCTTACCAGC GGTATTATAA GTTATTATTT CTTAACGCCG
GTATATAGTG CGACAGCGAC AATATTGGTT AACAACAAAA GTCAAAGGAT TATGGGTGGA
CTCGATTATC AAGACATTAT GCTGTCTACT GAATTGGCAA AGACATATAG TAAGATTGCT
GTTAGCAGAA CTGTGGCTGA AAAAGTACTC CAAGTTGAAA AACTAGATAT AACCCCGGAT
CAATTTATTG GCAAAGTTAG TGTTCAGCCT GTTAAGGAGA GCCAGTTAAT AAATATAACT
GTTGTAGATC CAAATCCCAA TACAGCCGCT CATTTGGCTA ATATTACTAG TAGGGTTTTT
GTGGAAATAA TTGTTGATAT CATGGAACTT AATACTAATG GTGCAAAAGT AATAGATATA
GCAATACCAT CAAATTCGCC CATTAAGCCA AATGAAAAAC TTAATATATT AATTGCAGGT
TTATTAAGCT TGATGATTGC GATTGGTATT CTCTTATTGC GTGAGTTTAT AGATCAAACC
GTCAAATCAA ATGAAGACAT AGAAAGATAC TTTGGTTTGC CGGTTTATGG TAATATACCG
AAAATCAAAT AA
 
Protein sequence
MELEIKDIIR ILKKGKLLLL ILPFIAVLTS GIISYYFLTP VYSATATILV NNKSQRIMGG 
LDYQDIMLST ELAKTYSKIA VSRTVAEKVL QVEKLDITPD QFIGKVSVQP VKESQLINIT
VVDPNPNTAA HLANITSRVF VEIIVDIMEL NTNGAKVIDI AIPSNSPIKP NEKLNILIAG
LLSLMIAIGI LLLREFIDQT VKSNEDIERY FGLPVYGNIP KIK