Gene Dtox_3256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_3256 
Symbol 
ID8430250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp3453856 
End bp3454938 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content51% 
IMG OID645035495 
Producttwitching motility protein 
Protein accessionYP_003192614 
Protein GI258516392 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT 
TIGRFAM ID[TIGR01420] pilus retraction protein PilT 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGAGC AAAAAGCGGT TGATGTGAAT GAGATATTAA AAAAAATGGT GCAAATGGAC 
GGTTCAGACC TGCACCTGAC AGCCGGTATG CCTCCGGTGG TGCGGGTCTA CGGTGAGCTT
TTGCGTATGG ATTATCCCAA GCTGATGCCA AGGGATATAG AGGATCTGGT TTATCCGGTT
TTGCTGCCCG GTCAAAGGGA ACAGCTGGAA AAAGAATGGG AATTGGATTT CTCTTATTCG
GTGCCGGGTG TCAGCCGTTT TCGGGGAAAT ATTATGTGGC AGAGAGGTTC CCTGGCGGTT
AATTTCCGGG CGGTAGCCAT AAATATTCCT GATATGAAGG ACCTGAACCT GCCTCCGGCA
GTCAGGGGTT TATCCCAGCT GCCCAGAGGA CTGGTGCTGG TTACCGGGCC TACGGGAAGC
GGCAAGTCAA CAACCCTGGC TTCCATTATT AAACTGATTA ACGAAGAGCA GTCCTTAAAT
ATTGTTACTA TCGAAAATCC CATAGAATTT TTGCACAGCC ACAAAAAATC TATTATCAAG
CAGAGAGAAG TGGGGACAGA CACTTTTTCC TTTGCCAGTG CTCTGAGGCA TGTACTGCGG
CATGATCCGG ATGTGATACT GGTGGGAGAG ATGAGAGATA TGGAGAGTAT ATCCATTGCC
CTTACCGCCG CCGAGACAGG GCACCTGGTA TATTCCACCC TGCATACGCA GACGGCCCCT
TTGGCCCTGC ACCGTATTAT TGATGTTTTT CCCGACAGCG CCCGCAATCA GATTCGTCAG
CAGCTGGCCG ATTCTCTGCA GGCTGTTTTG GCCCAGCAGT TAATCCACCG GGCCGACGGC
AAGGGAAGGG TGGTTGCGGT AGAGTTATTG CTGAGCACGC CGGCTGTGAG AAACCTGATC
AGAGAGGGCA AAGAGCACCA GCTTTATACG GTTATGCAGA CTTCACGCAA CACAGGCATG
CAGACCATGG ATCAGGCTCT GGCTGAACTT TTCTTAAGCG GAAAAATTAC GCGGGATATG
GCCCTGGAGC ACTGTGTTGA CCGGGTTGAG CTGGAGCGTG TGCTGCGGCG GGGCCAGTAT
TGA
 
Protein sequence
MDEQKAVDVN EILKKMVQMD GSDLHLTAGM PPVVRVYGEL LRMDYPKLMP RDIEDLVYPV 
LLPGQREQLE KEWELDFSYS VPGVSRFRGN IMWQRGSLAV NFRAVAINIP DMKDLNLPPA
VRGLSQLPRG LVLVTGPTGS GKSTTLASII KLINEEQSLN IVTIENPIEF LHSHKKSIIK
QREVGTDTFS FASALRHVLR HDPDVILVGE MRDMESISIA LTAAETGHLV YSTLHTQTAP
LALHRIIDVF PDSARNQIRQ QLADSLQAVL AQQLIHRADG KGRVVAVELL LSTPAVRNLI
REGKEHQLYT VMQTSRNTGM QTMDQALAEL FLSGKITRDM ALEHCVDRVE LERVLRRGQY