| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_3244 |
|---|
| Symbol | |
|---|
| ID | 8430238 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | - |
|---|
| Start bp | 3441166 |
|---|
| End bp | 3442236 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 645035483 |
|---|
| Product | twitching motility protein |
|---|
| Protein accession | YP_003192602 |
|---|
| Protein GI | 258516380 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
|---|
| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATATCC TTCAACTCCT TCAGTATGCT GTTAAGCAGG AGGCATCCGA TTTGCATGTA
ACCGCAAATT CTGCCCCAGT GCTAAGATTG CACGGAAATT TGACCGTGCT TGATTTACCG
CCGCTTTTAC CGGAAAAAAC ATTGGAAATG GCCCGTCAGT TGCTGGATCA AAACAAACTT
GAGCTACTAG AGAAAAACGG TGAAGTAGAC TCCTCATATA ATTATTCCGG TGTAGGTAAT
TTTCGAATAA ATGTATATTA CCAGAGAGGC GCGGTGAGTA TTGCTGTCAG GGTTTTAGAT
ACAAAGATTC CGACTATAGA TGCTCTCGGT CTTCCTGATA TCGTAAAAAC CTTGGCTCGC
CGATCAGGCG GGCTGATTCT AATCACAGGC CCGACAGGCA GCGGTAAGTC GACTACCATG
GCCGCCATGG TTGATTTAAT TAATAAGGAA AAAAGCTGTC ATATCCTGAC CTTGGAGGAC
CCTATTGAAT ACCTGCATAT TAATAAAAAA AGTATCATTG AGCAGAGAGA AATAGGCAAG
GACAGCAGGA CCTTTCCCAG CGCTTTGCGG GCAGCGCTCA GGCAGGATCC TGATGTTATT
CTGGTAGGAG AAATGAGGGA TTTGGAAACT ATATCTATTG CCGTCACCGC GGCAGAAACC
GGTCATCTGA TTCTGGCCAC TTTGCACACT ATGAATGCGC CCCAAACTGT CAGCCGGATT
ATTGATGCTT TTGATTCGGT TCAGCAGAAG CAAATTCGTA TGCAGCTGTC CAATTCTTTA
GTAGGCATCA TCTCTCAGAG ACTTTTGCCT CGCATTGACG GAAGGGGACG GCTGGCAGCC
ATGGAAATAC TGGTGGCCAC ACCGGCGGTG CGCAACCTGA TCAGAGAAAA CAAGCTTCAT
CAGATTTTTT CTTACTTGCA GGCGGGTTCC AAATTTGGCA TGCAGACAAT GGATAGCCAC
CTGCAAAGTT TGTATAATAA TAAACTGGTC AATTCCCGAA TAGTTTTAGA AAATGCGGCG
GACCGGGAGG CTATGCTGCG TTATTTGGGT ATATCTGAGG ATACCTTCTA A
|
|---|
| Protein sequence | MDILQLLQYA VKQEASDLHV TANSAPVLRL HGNLTVLDLP PLLPEKTLEM ARQLLDQNKL
ELLEKNGEVD SSYNYSGVGN FRINVYYQRG AVSIAVRVLD TKIPTIDALG LPDIVKTLAR
RSGGLILITG PTGSGKSTTM AAMVDLINKE KSCHILTLED PIEYLHINKK SIIEQREIGK
DSRTFPSALR AALRQDPDVI LVGEMRDLET ISIAVTAAET GHLILATLHT MNAPQTVSRI
IDAFDSVQQK QIRMQLSNSL VGIISQRLLP RIDGRGRLAA MEILVATPAV RNLIRENKLH
QIFSYLQAGS KFGMQTMDSH LQSLYNNKLV NSRIVLENAA DREAMLRYLG ISEDTF
|
|---|
| |