Gene Dtox_3218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_3218 
Symbol 
ID8430212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp3416126 
End bp3416899 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content56% 
IMG OID645035462 
Product16S ribosomal RNA methyltransferase RsmE 
Protein accessionYP_003192581 
Protein GI258516359 
COG category[S] Function unknown 
COG ID[COG1385] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00046] RNA methyltransferase, RsmE family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000318733 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000151601 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCAGGG TGTATGTACC GCCTACCCGC ATAAAGGGTA GGCAGGCTTG CATTACGGGG 
ACGGAAATGG AGCACGTCAA CCGCGTTTTG CGCCTGGCAG CCGGAGATGA AGTGACCATA
ATCGACGGTG AGGGCGGTGT ATTTTCAGCC CGTATTACCG GGAAAAATAA AGAAAAAGTC
TTCTGCGAAA TAACCGCTGA GGGCCTGCCC GATAACGAGC CCCCGGTCAA AATAACCCTG
GTTCAGGGAC TGCCCAAGTC CGACAAAATG GACTTAATCG TACAGAAAGG CACCGAGCTG
GGCCTGTCCA CACTCATACC CCTGCAGTGT GAGCGGGCGA TAGTCCGCCT GGACGAAAAA
AAAGCCGCTC AGCGCCAGGA ACGCTGGCAG AGAATTGCCA TGGAAGCGGC CAAACAGTGC
AAAAGGGGCA AGCACCCGTC GGTAGAGAGA GCCATGAGCT GGCAAGAAGT CTTGGAGTCC
CTGCCCGAGA AAGCGCTGTG CCTGCTGCCC TGGGAAGAGG AAACAGCCAG AGGCCTGAAA
AGCCTGCGCG ATAATCTGGA AGCTAAAGTC CCCCCTTTCG AAATCTATAT CTTCATAGGC
CCCGAGGGTG GCTTCACCAG GTCGGAAGCA GCACAGGCGC GGCAGTACGG AGTAATCCCC
GTCTCCCTGG GTCCCCGCAT ACTGCGCACA GAAACCGCCG GCATAGCTGT CTTAAGCATA
ATCATGTACG AGTTCGGCGA TTTAGGCGGA ACCCCGGCTG ACTATAAAAG TTAG
 
Protein sequence
MTRVYVPPTR IKGRQACITG TEMEHVNRVL RLAAGDEVTI IDGEGGVFSA RITGKNKEKV 
FCEITAEGLP DNEPPVKITL VQGLPKSDKM DLIVQKGTEL GLSTLIPLQC ERAIVRLDEK
KAAQRQERWQ RIAMEAAKQC KRGKHPSVER AMSWQEVLES LPEKALCLLP WEEETARGLK
SLRDNLEAKV PPFEIYIFIG PEGGFTRSEA AQARQYGVIP VSLGPRILRT ETAGIAVLSI
IMYEFGDLGG TPADYKS