Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtox_3202 |
Symbol | |
ID | 8430196 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum acetoxidans DSM 771 |
Kingdom | Bacteria |
Replicon accession | NC_013216 |
Strand | - |
Start bp | 3403404 |
End bp | 3404465 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 645035448 |
Product | 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
Protein accession | YP_003192567 |
Protein GI | 258516345 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00281506 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00000333931 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGGCGAA GGAAAACCAG GGTTATCCGG GTTGGTCAGG TGGCAGTCGG CGGTGACGCG CCGGTCAGTG TGCAGTCCAT GACCAACACG GATACCAGAG ACGCTGCGGC AACTGCCAGG CAGATCAGGG AGCTGGCTCT GGCCGGGTGT GAAATTGTGC GGGTGGCAGT GCCGGATGAG CAGGCGGCGG TCGCTTTAAA GGAAATCAAG AACGGTATTA ACGTGCCCTT GATTGCGGAT ATTCATTTTG ATTATAAGCT GGCCCTGCAG GCTATCCGGG CAGGTGTAGA CGGACTGCGC ATCAATCCGG GCAATATTGG CAGCAGGTCT AAAGTGGCCG AGGTGGTCAG GGCTGCCGGG GACGCTCAGG TTCCTATCAG AATCGGGGTC AATGCCGGTT CATTGGAAAA AGAGCTGTTG GATAAGTATG GAAATATAAC AGCTCAGGCT ATGGTGGAAA GCGCTCTCGG TCATATCGGC ATTTTAGAAG ATTTAAATTT CAGTGATATA AAGATCTCTT TAAAGGCCTC AGACATTCCT TTAATGCTGG AGGCCTATCG CCTTTTGGCC GACCGGGTGG ACTATCCTTT TCATATAGGT GTAACCGAGG CGGGTACTTT GCGCTCCGGT ATTGTCAAGT CAGCTGTGGG CATCGGGGCA CTGCTGGCTG AAGGTATCGG TGATACGCTC AGGGTTTCAC TGACAGGGGA CCCACTGCAC GAGGTAAAGA CTGGCTATGA GATTCTAAAG GCTTTGGGCC TGCGCCAGAG AGGCATTGAA TTTATTTCCT GTCCCACCTG CGGGCGGACT CAGATTGATT TAATTCGTAT TGCCAATGAG GTGGAGGACA GGCTGCAGTT TGTAGATAAG CCGCTCAAGG TGGCGGTGAT GGGCTGTTCG GTCAACGGTC CCGGTGAGGC GCGGGAGGCC GATATTGGGA TTGCCGGTGG CAGGGGGGCC GGGTTATTGT TTAAAAAAGG CCGGACTGTG CGAAAGATTG AGGAAGCGGA TTTGGTGGAA GAGCTTATTA AAGAAGTAGA AAATATGTTG GAAAATTATT AA
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Protein sequence | MRRRKTRVIR VGQVAVGGDA PVSVQSMTNT DTRDAAATAR QIRELALAGC EIVRVAVPDE QAAVALKEIK NGINVPLIAD IHFDYKLALQ AIRAGVDGLR INPGNIGSRS KVAEVVRAAG DAQVPIRIGV NAGSLEKELL DKYGNITAQA MVESALGHIG ILEDLNFSDI KISLKASDIP LMLEAYRLLA DRVDYPFHIG VTEAGTLRSG IVKSAVGIGA LLAEGIGDTL RVSLTGDPLH EVKTGYEILK ALGLRQRGIE FISCPTCGRT QIDLIRIANE VEDRLQFVDK PLKVAVMGCS VNGPGEAREA DIGIAGGRGA GLLFKKGRTV RKIEEADLVE ELIKEVENML ENY
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