Gene Dtox_3199 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_3199 
Symbol 
ID8430193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp3399752 
End bp3400399 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content36% 
IMG OID645035445 
ProductAccessory gene regulator B 
Protein accessionYP_003192564 
Protein GI258516342 
COG category[K] Transcription
[O] Posttranslational modification, protein turnover, chaperones
[T] Signal transduction mechanisms 
COG ID[COG4512] Membrane protein putatively involved in post-translational modification of the autoinducing quorum-sensing peptide 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000122343 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGCTGAGTC TCTATAACCT GTCAGATAAA ATAGCCAGAT ATTTAACCGA AATTACAGCA 
TGTAATCCAA ATGAGACTGA TACCGTACGG TATGGTTTGG AAATTATTCT GGGCGCAATG
ATAAAAGGAA TAACCCTTTT TTCGATAGCT TACTATTGGG GTATACTTCA TGAGGTTTCT
GCAGTTCTCA TTTGCAGCAT TTCGTTGCGA CTGGTGAGCG GCGGTGCACA CTGTAACACT
TATTTAAGAT GCCTGTTTTG TAGTACAATT ATCTACCTTT CTGCTGGCAA GGTAGCTATA
TTTTTGGATA AGGCTTTAGA CGAACTTCAA TTTATATTAA TATTATTGCC CTGTTTTTTT
CTGATGCTTA CCAGTGCTTT TCTATGGGCA CCTGGAAAAG TGCCATTCAG AATAATCAAT
TCTAACGAAT CACTTATTTT TAAAATACTT ACCGTTTTAT TGCTGATTAG CTGGTTGGCT
ATTGTATTTT GTTATAGCTT GCACTTACAA CTATCCATAA TAATTGCAGG TTTGCTGGGA
TTACTAATTC AGACTTTCAG CTATACTCCT CTTGGCTACA AAGCAATTCA AAAAATTGAC
GCAATGCTAT CAAAAGTAAA AATTACTGTT ATGAAAGGAG GTGTCTAA
 
Protein sequence
MLSLYNLSDK IARYLTEITA CNPNETDTVR YGLEIILGAM IKGITLFSIA YYWGILHEVS 
AVLICSISLR LVSGGAHCNT YLRCLFCSTI IYLSAGKVAI FLDKALDELQ FILILLPCFF
LMLTSAFLWA PGKVPFRIIN SNESLIFKIL TVLLLISWLA IVFCYSLHLQ LSIIIAGLLG
LLIQTFSYTP LGYKAIQKID AMLSKVKITV MKGGV