Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtox_3180 |
Symbol | |
ID | 8430174 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum acetoxidans DSM 771 |
Kingdom | Bacteria |
Replicon accession | NC_013216 |
Strand | - |
Start bp | 3379963 |
End bp | 3382203 |
Gene Length | 2241 bp |
Protein Length | 746 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 645035426 |
Product | Polyribonucleotide nucleotidyltransferase |
Protein accession | YP_003192545 |
Protein GI | 258516323 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.846647 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAATTT TAAAGAAAGA ATTAAACATA GGCGGCCGGG TGTTAACTAT TGAAACCGGT AGAGTAGCCA AGCAGGCGGG TGGCGCGGTT CTGGTTGCCT ATGGTGATAC AGTAGTATTA TCTACGGCTA CCATGTCCAG GACTCTGAGA GAGGGTATTG ATTTTTTCCC CTTGACGGTG GAGTATGAGG AAAGACTTTA TGCCGTAGGA AGAATCCCCG GGGGTTTTAT TAAGAGGGAA GCCCGTCCCA GCGAAAATGC CATATTGTCT TGCCGTTTGA TCGACAGATC TATACGACCT TTATTCCCCA AGGGTTTTCG CAATGAGACG CAGATTATCA ATACCATTAT GTCGGTCGAT CAGGACCACG CGCCGGAAAT GGCGGCAATG ATCGGAACCT CGGCAGCCTT GACCATATCT GATGCTCCTT TTAACGGTCC TATTGGCGGG GTTATTGTCG GCAGGGTAGA CGGTGAATTA ATTATCAACC CCAATGCAGC CCAGTCGGCA AAGAGTGATC TGCACCTGGT GGTGGCAGGT ACCAAGGACG CGGTGATGAT GGTGGAAGCA GGGGCTAATG AAGTAACTGA GGAAGTAATG CTGGATGCTA TCGCCTACGG TCACGATGTC ATTCGTCAAA TCGTTGATTT TATAGATGAG TTCAGGCAGG AAGCGATTGA GCAGCAGTTG GCCAAGCCCA AGCTGGAATT TGCAGCTCCC GAAGAGAATC AGGAACTTAT CGAGGCTATC GGCGAAACTA TGGAAGCGGA AATAAAAATG GCTGTGCGCA AATGTGTTGA AGAACGTATG GATAAGAAAA CACGGGAAGC TTTTTTTGAT GAGTTGAAGG ACAGGCTGGT TCTGGAATTT GCTGAGCAGT ATCCTGAGCA GGTGTCAGAT ATAAAAGACT TGTTTAGGAA AATTGAGAAA AAGCTGGTGC GGCAGTTAAT CGTTAAGGAT CGCATCAGAA TGGATGGTCG GGCGCTGGAT GAGGTTAGGC CTATTTCTGT GGAGGCCGGT GTTTTGCCTC GTACGCATGG TTCAGGTTTA TTTACCAGGG GTCAGACACA GATTTTGTCT GTGGTTACGC TGGGTGCCAT ATCTGAGGAG CAGATTCTGG ACGGTTTGGG AACAGAAGAA TCTAAGCGCT ACATGCACCA CTACAATTTT CCTCCTTTTA GTACCGGTGA AACCAAGATG ATGCGTTCGC CGGGCCGCAG GGAAATCGGT CATGGTGCTC TGGCCGGACG TGCTCTGGAA CCTATGATTC CCGGTGAGGA AGAGTTTCCT TATACTATTC GCGTGGTTTC TGAAGCTCTG GAATCTAACG GTTCGACTTC CATGGGCAGT GTCTGCGGCA GCACGCTTGC TTTAATGGAT GCAGGTGTTC CGATTAAAGC TCCCGTGTCC GGTGTAGCCA TGGGTTTAAT CAAAGAGGAC GATGAGATTG TCGTGCTCAC TGACATTCAA GGCCTGGAAG ACGCTCTGGG CGATATGGAC TTTAAAGTTG CCGGTACGGC GAAAGGCATC AATGCGCTGC AGATGGATAT TAAAGTGGCA GGGGTTACCC AGGAAATTCT GGAAAAGGCT TTGCAGCAGG CTTATACCGG CAGGATGCAC ATCATGGGTA AAATGATGGA AGTTATCTCT GCCCCGCGCC AGGAATTGTC CAAATACGCG CCCATGATTA TTCATACTAC GATTAATCCT GACAAGATCA GGGATGTAAT TGGTCCCGGC GGCAAGACAA TAAAGAAAAT TGTTGAGGAA ACCGGTGCCA ATATAGATAT AGAAGATGAC GGCAGGGTAT TTGTAGCAGC TGTAGATCGT GAAGCAGGGC AGAAAGCTCT GAGTATTATT GAAAAGTTGA CACAGGAAGT TGTCATCGGT CAGATTTATC TGGGCCGGGT AGTCAAAATA ATGGATTTCG GCTGTTTTGT GGAAATTATT CCTGGAGTGC TGGGCCTGCC GGGTAAGGAA GGTCTGGTGC ATATATCTCA ACTGGCGCAC CAGAGGGTAA ATAAAGTTGA GGATGTAGTA GCTGAAGGTG ATATGATTCT GGTTAAGGCT ATTGGCAATG ATAATATGGG ACGTCTCAAG CTTTCTAAAA AAGAAGCGAT GCCCCAGGAA GGCAAGGAAG CGGAAGCCCA GAGCAGTGAG AACGGCAGTA AAGAGGAAAA CGGCAGCAGG GAAAGCCGTC ACAGGAGAGG CGGAGCCCGT CCTCCTCGTA AAACAGTATA A
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Protein sequence | MSILKKELNI GGRVLTIETG RVAKQAGGAV LVAYGDTVVL STATMSRTLR EGIDFFPLTV EYEERLYAVG RIPGGFIKRE ARPSENAILS CRLIDRSIRP LFPKGFRNET QIINTIMSVD QDHAPEMAAM IGTSAALTIS DAPFNGPIGG VIVGRVDGEL IINPNAAQSA KSDLHLVVAG TKDAVMMVEA GANEVTEEVM LDAIAYGHDV IRQIVDFIDE FRQEAIEQQL AKPKLEFAAP EENQELIEAI GETMEAEIKM AVRKCVEERM DKKTREAFFD ELKDRLVLEF AEQYPEQVSD IKDLFRKIEK KLVRQLIVKD RIRMDGRALD EVRPISVEAG VLPRTHGSGL FTRGQTQILS VVTLGAISEE QILDGLGTEE SKRYMHHYNF PPFSTGETKM MRSPGRREIG HGALAGRALE PMIPGEEEFP YTIRVVSEAL ESNGSTSMGS VCGSTLALMD AGVPIKAPVS GVAMGLIKED DEIVVLTDIQ GLEDALGDMD FKVAGTAKGI NALQMDIKVA GVTQEILEKA LQQAYTGRMH IMGKMMEVIS APRQELSKYA PMIIHTTINP DKIRDVIGPG GKTIKKIVEE TGANIDIEDD GRVFVAAVDR EAGQKALSII EKLTQEVVIG QIYLGRVVKI MDFGCFVEII PGVLGLPGKE GLVHISQLAH QRVNKVEDVV AEGDMILVKA IGNDNMGRLK LSKKEAMPQE GKEAEAQSSE NGSKEENGSR ESRHRRGGAR PPRKTV
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