Gene Dtox_3178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_3178 
Symbol 
ID8430172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp3377539 
End bp3378660 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content45% 
IMG OID645035424 
ProductSerine-type D-Ala-D-Ala carboxypeptidase 
Protein accessionYP_003192543 
Protein GI258516321 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1686] D-alanyl-D-alanine carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.152146 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATAA ATATGCTGAG AGTGCTGCCG TTTTTTTTGT TATTATTGAA TGTTTATTGT 
CTACCGGTAC AGGCGGCTTA TAGTCCGCCA GTTGCCGCAG AGTCTGCTGT TTTAATGGAT
GTTGGCAGCG GCCAGGTATT ATACCAGAAA AATGCTTTTC AAAGACGTCC TCCGGCCAGT
ACAACTAAGA TTTTAACCGC TCTTCTGGCC TTAGAGGGGG GAGATTTGGG TCAAGTTGTA
ACGATTAGTA AAACGGCTGC CTCTACGGGT GAATCCAGCA TATACCTGCA GGCGGGAGAA
AATTTAACTT TAGAGGAACT TATATACGGC GCGCTGTTGA AGTCCGGCAA TGATTCTTGC
GTGGCTATCG CCGAACAAAT AGCCGGAACC GAGGCAAATT TCGTACAACT CATGAACGAA
AAGGCTAAGC AAATGGGTGC AATGGATTCT CATTTTGTCA ATTGTAACGG CTTGCCGGCT
GAGGGGCATT ATTCAACTGC CTACGACCTG GCTAAATTGA CTTGTTATGC TCTGCAAAAT
CCTGTGTTTA ATACTGTTGT CAGTACCAGG GAGAAGGTAA TCAGAGGTCC CGGCTGGCAG
AGGCACTTGC AGAATACTAA TCAGCTATTG GATACTTATA CCTTTGCGGA CGGGGTTAAA
ACCGGTACAA CCAATGCTGC CGGTCCCTGT TTGGTAGCCT CGGCTACGCG GGATAACCGG
AGATTGGTCA GTGTGGTTTT ACACAGTGCT AACCGGTATG GTGACAGTAA ATCTCTTCTG
GAGTACGGTT TTAATAATTT TTCCAATAAT AAAGTTTTAA CCGCAGGACA AGTTATCGGC
GACATACCTG TCTGTGACGG GTTTTCCCCG GCGGTTCAAG CAGTGTCAAA AGGAGATTTG
ACAGTTGTTA TTCCCAATGG CCGCACTGAT TTAATTGAAA AAAAGATTTA CCTGGTTGAC
GGTTTAACCG CGCCGGTTAA AAAGGAGCAA AAAATCGGCC GGGTAGATTT GTATATGGAT
AAGGTATATA TAGCCAGTAC TGATTTAATT GCCTCGGGGA GTATTGAAAG GCTTCCTGCC
TACCGGATTC TTTGGCGTAA ATTTTACCAA AATATCGGGT AG
 
Protein sequence
MKINMLRVLP FFLLLLNVYC LPVQAAYSPP VAAESAVLMD VGSGQVLYQK NAFQRRPPAS 
TTKILTALLA LEGGDLGQVV TISKTAASTG ESSIYLQAGE NLTLEELIYG ALLKSGNDSC
VAIAEQIAGT EANFVQLMNE KAKQMGAMDS HFVNCNGLPA EGHYSTAYDL AKLTCYALQN
PVFNTVVSTR EKVIRGPGWQ RHLQNTNQLL DTYTFADGVK TGTTNAAGPC LVASATRDNR
RLVSVVLHSA NRYGDSKSLL EYGFNNFSNN KVLTAGQVIG DIPVCDGFSP AVQAVSKGDL
TVVIPNGRTD LIEKKIYLVD GLTAPVKKEQ KIGRVDLYMD KVYIASTDLI ASGSIERLPA
YRILWRKFYQ NIG