Gene Dtox_3172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_3172 
Symbol 
ID8430166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp3372955 
End bp3373941 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content42% 
IMG OID645035418 
Productprotein of unknown function DUF114 
Protein accessionYP_003192537 
Protein GI258516315 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0616] Periplasmic serine proteases (ClpP class) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.601853 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAGGT CAGAAAGATT GAGCTTAATA AACGCTATAG AAAACAAGAG GTGTTCCAAA 
TTAATTTGCT ATATTACCGG TGACAGGGAA AACGTCAATA CCCGCATAGC TCCTGATGTA
ACTACTATTT TATACCGTCA CCTGGAAATG TTGAAAAACC AGCCTAAAAT AGATCTTTTC
CTTTATACAA GAGGCGGGGA TGTTCTAACT CCCTGGCGGC TGGTAAATTT GATTAGGGAA
TATACAGAGC ATTTTTCGGT AATCGTGCCT TTTCGCTCTT ATAGCGCCGG TACTTTGATT
TGTCTGGGTT CTGATGAAAT AATTATGGGA AAAATGGGTG AGCTGGGGCC TATTGATCCC
AGTGTGGTAA ATGCTTTTAA TCCACAGGAT CCGAACAACC CACAGGCCAG AGTGCCGGTG
AGCATTGAGG ATGTTTATTC TTACCTGGCT TTGGCCCGTG AAAAGTCAGG AAGCCACCTG
GACGAACTGA TGGACAAGTC CTTTTTGCTT TTAGCTGAAA AAATTCATCC TTTGGCCCTG
GGCAATGTGC ACCGGAACTA TATGTTGATA AGGTCACTGG CTACCAAATT ATTGCGCCTG
CAGATGAACC CGCCTTCGGA TGATAAGATA ATAAGTATTG TTGATAATTT GACTGAAAAA
TTATACGCTC ATAATCATAT GATTTCAAGG CGTGAAGCGG ATAAGGAAAT ACAATTGCCG
GTACTCTATC CTGACCCTTA TTTGGAAGAC TTGATTTGGA AGCTATATGC TGATTTTGCT
CAGGAGATGG CTTTAAACGA GCCGTTTAAT CCTGCCGATA TGTTAAATGG GCCTCGTATT
GAATTCGAGG TTGTCAGTGG TCTTGTAGAG TCTTCTATGG GGCAGGACGC GTTCGTATTT
AGCGGTGTGG TAGAAAGAAA AGAGTTTCCT GATAAAGGGC AGGTTAATGT AAATATTGTA
AAGCAAGGAT GGAGATCTTT AGCTTAA
 
Protein sequence
MSRSERLSLI NAIENKRCSK LICYITGDRE NVNTRIAPDV TTILYRHLEM LKNQPKIDLF 
LYTRGGDVLT PWRLVNLIRE YTEHFSVIVP FRSYSAGTLI CLGSDEIIMG KMGELGPIDP
SVVNAFNPQD PNNPQARVPV SIEDVYSYLA LAREKSGSHL DELMDKSFLL LAEKIHPLAL
GNVHRNYMLI RSLATKLLRL QMNPPSDDKI ISIVDNLTEK LYAHNHMISR READKEIQLP
VLYPDPYLED LIWKLYADFA QEMALNEPFN PADMLNGPRI EFEVVSGLVE SSMGQDAFVF
SGVVERKEFP DKGQVNVNIV KQGWRSLA