Gene Dtox_3113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_3113 
Symbol 
ID8430107 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp3309464 
End bp3310528 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content43% 
IMG OID645035369 
ProducttRNA 2-selenouridine synthase 
Protein accessionYP_003192488 
Protein GI258516266 
COG category[R] General function prediction only 
COG ID[COG2603] Predicted ATPase 
TIGRFAM ID[TIGR03167] tRNA 2-selenouridine synthase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.227771 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTATAAAA ATATTACTAT GGAGAAGGCA CTGGAGGATA CTGATAGTTT GCTGGTAGAC 
GTGCGGTCTG AAGATGAATA TAATGAAGAT ACTGTTCCCT TTGCGGTTAA TATACCTCTT
TTGAATAATG AAGAGCGGAA TATGGTTGGT ATTGTATATA AAAAGGAGGG ACAGGATGAG
GCCAGGCGCC TTGGTTTGCA GTTGGTAGCT CCTAAACTGC CGCAAATGGT CGACAGTTAT
GCCAGGCAGG CGGCAAATAA AAAGATAACT GTTTTTTGCT GGCGAGGGGG AGCCAGGAGT
GAAGCCATAG CCTCACTGCT GGACGGACTG GGATTTAAAG TAAATAGAGT TTTGGGAGGC
TATAAAGCTT ACCGCCGCAT GGTATTTAAC TTTTTCGACC GGCCTTTGTT GCCCTTTAAA
GCCGTTATTT TACACGGTCT GACCGGGGTA GGCAAAACAG ATGTTATAAC CGGTCTTAAA
GCTCAGGGCA TACCTGCTCT TGATCTGGAG GGATTGGCCG AGCACCGGGG ATCTGTTTAT
GGGAAAATCG GTTTGCCGTC TTCCCCCAGC CAGAAAAAGT TTGAAAGCAG GATTTATGAG
TTTTTTCGAT GCAGCAGATC AGGTGTTTTT GTAGTTGAAT GTGAGAGCCG TCGATTGGGT
AAATTACTTT TACCGGAGTC GCTTATGTCA ACCATGCAGC AGGGTTATAA TCTTTTGCTT
TATGCCAGCC TCCGGGAACG GGTGGAACGT ATTGAAAAGG TTTATGCAAA GGACATGGAG
CTAAACCTGG AAAATTTATA TGAAGCGACA AATCATTTGA CCAAACATCT GGGGAAGGGA
AAAATCACGG AGTTGAATGA ATTGCTGCAA GATAAGAAAA TTAAAGAGTT TATCGGGTAT
TTATTAACAG AGTACTATGA TCCCTTGTAT AAATACCCTC AGGGCCCTTC AGACAAATAT
TTACTCTCGA TTAATTCTGA TAATATTAAT GATGCTGTTA TTGCAGTTAG GAGCTTTATG
GCTAATTTGC CTGAAAATCA AAGCCTTGAT CAAGAGGTGG GATAA
 
Protein sequence
MYKNITMEKA LEDTDSLLVD VRSEDEYNED TVPFAVNIPL LNNEERNMVG IVYKKEGQDE 
ARRLGLQLVA PKLPQMVDSY ARQAANKKIT VFCWRGGARS EAIASLLDGL GFKVNRVLGG
YKAYRRMVFN FFDRPLLPFK AVILHGLTGV GKTDVITGLK AQGIPALDLE GLAEHRGSVY
GKIGLPSSPS QKKFESRIYE FFRCSRSGVF VVECESRRLG KLLLPESLMS TMQQGYNLLL
YASLRERVER IEKVYAKDME LNLENLYEAT NHLTKHLGKG KITELNELLQ DKKIKEFIGY
LLTEYYDPLY KYPQGPSDKY LLSINSDNIN DAVIAVRSFM ANLPENQSLD QEVG