Gene Dtox_3092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_3092 
Symbol 
ID8430086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand- 
Start bp3289391 
End bp3290401 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content51% 
IMG OID645035348 
Productcobalamin biosynthesis protein CobD 
Protein accessionYP_003192467 
Protein GI258516245 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1270] Cobalamin biosynthesis protein CobD/CbiB 
TIGRFAM ID[TIGR00380] cobalamin biosynthesis protein CobD 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.423715 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00432553 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCGGAA TAACTGGCAC AGATTTCAAT ACAACAGTAT TAAATATAAC CATAATCAAT 
GTAGTTGCGG CATATTTCCT GGATTTGCTG ATAGGAGACC CGCGCTGGCT GACTCATCCG 
GTGGTCATAA TCGGCAAATT GATCAGCTGG TTGGAAGCAG TTTTTTTTAG GTTATGCAAA 
AGTCCCGCAG CATTGCGCCT GGCGGGATTA TTGCTGGCTG TCACAGTGGT TGCTGCTGCT 
TACTCGGTTA CCCGTCTGAT TGTGGAAGCT TGCACCGGCA TAAATCCTCT TTTGGGCCAG 
GCAGTGGAAA TCTGGCTGCT TTCAACGACC CTGGCGGCTA AAAGTTTGGC CGGAGCCGGA 
AGAGAGATTT ACCGTCTTTT ACTGGACGGA AATCTGCAGG AGGCCCGTGT CAAAGTAGGC 
TGGATTGTTG GACGCGATAC GGCAAAACTG GATCAGTCCG GTGTGACCAG AGCCACAGTA 
GAAACTGTGG CGGAAAATAT TGTTGACGGA GTGCTTTCTC CTCTATTCTA TGCTTTCCTG 
GGAGGAGCCC CGCTGGCTAT GGCCTATAAA GCAGTCAATA CCCTGGATTC CATGGTAGGC 
TACAAGAATG AAAAATACCT GCACCTGGGC TGGGCCTCGG CCCGTCTGGA TGATTTGGCC 
AATTTTCTGC CCGCCCGCTG GGCCGGTGCC CTGCTGTTGT CTGCCAGCGC CCTGTTGGGC 
TACAACAGCG GGCAGGCTTA TCACACGATA AAAACTTACG CCGCCGGTCA TCCCAGTCCC 
AACAGCGGCA TTCCCGAGTC AGCAGTAGCA GGTGCCCTGG GTGTCCGCTT GGGCGGACTG 
AATTCCTACC ACGGGCAGGT CTCTTTACGA GCCTATATGG GGGAGGAATT AGTGCCCCTG 
GAGGCCAAAC ATATAGCGGA GACAATTAAG CTTATGTATG CTGCCTCTGC TCTGGGAGTA 
TTGTCCGGCG CTGTTTTGCT TACAGTATTT ACTAAAATTT ATTCTCTTTA A
 
Protein sequence
MTGITGTDFN TTVLNITIIN VVAAYFLDLL IGDPRWLTHP VVIIGKLISW LEAVFFRLCK 
SPAALRLAGL LLAVTVVAAA YSVTRLIVEA CTGINPLLGQ AVEIWLLSTT LAAKSLAGAG 
REIYRLLLDG NLQEARVKVG WIVGRDTAKL DQSGVTRATV ETVAENIVDG VLSPLFYAFL 
GGAPLAMAYK AVNTLDSMVG YKNEKYLHLG WASARLDDLA NFLPARWAGA LLLSASALLG 
YNSGQAYHTI KTYAAGHPSP NSGIPESAVA GALGVRLGGL NSYHGQVSLR AYMGEELVPL 
EAKHIAETIK LMYAASALGV LSGAVLLTVF TKIYSL