Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtox_3050 |
Symbol | |
ID | 8430044 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum acetoxidans DSM 771 |
Kingdom | Bacteria |
Replicon accession | NC_013216 |
Strand | - |
Start bp | 3247850 |
End bp | 3248698 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 645035306 |
Product | polysaccharide deacetylase |
Protein accession | YP_003192425 |
Protein GI | 258516203 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0264951 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00155043 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGAAAAAGA GATTTTTGGC GATGGCTCTG TTGGCCGTGC TGGTTCTGTC CGGCGGGGCG ATTTGGCACT ATTGCCATTC AGATATAATT CCTATCGAAA CCGGTATTAA AGTTATGAAG GGAGTACCCG TATTAATGTA CCACAAAGTA AATCCTGACT CAGGTGCAGG GGGGTTTGGT TTGCGGGTCA CTCCGGAAAA CTTTGATTGG CAAATGCATT ATTTAAAGAA AAACGGTTAC CGGTCAATCA GTTTGGGAGA TATGCTGGAT AGTTTCCAGC ATAAAAAAGC CCTGCCGAAA AAGCCTGTAA TTATTACTTT TGATGATGGT TACCAGGATA ATTACAGGTA TGCTTATCCT ATTTTAAAAA AATATAATTA TACGGCAACG ATATTTGTTG TTGCCGGTCT TATAGGTAAA ACCAATGAGT TTGATGTAAA AAAACATTTG CAGCCGGAAA ATAAAATGAT GGACTGGTCT GAAATCATAT CCCTAGATAA TGCCGGAATA ACCATAGGTT CACATACCTT AACCCACCCT CACCTGACCG GTCTTTCCGA CGCTGAAGCC AGGCAGGAGA TTATGGTTTC CAAAAAAGTG CTGGAGGCTA AACTGGGCAG AGAAGTTCAG TTTTTTTGCT ATCCCTATGG CGAGTATAAT GAGTCAATGG TTAGACTGGT CAAGGAGGCC GGTTACCGTG CAGCCACCAC CACTAAGCAG GGCTTAAACT ATCAAAATAC TGATGCCTAT CTTTTAAAGC GGATAAGGAT AATGGGAAAG TATAATCATG AAAAATTTAT TGAGGAATTG CATAAATGGG ACTATACGGG CGAGTCTAAA GAATTATAG
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Protein sequence | MKKRFLAMAL LAVLVLSGGA IWHYCHSDII PIETGIKVMK GVPVLMYHKV NPDSGAGGFG LRVTPENFDW QMHYLKKNGY RSISLGDMLD SFQHKKALPK KPVIITFDDG YQDNYRYAYP ILKKYNYTAT IFVVAGLIGK TNEFDVKKHL QPENKMMDWS EIISLDNAGI TIGSHTLTHP HLTGLSDAEA RQEIMVSKKV LEAKLGREVQ FFCYPYGEYN ESMVRLVKEA GYRAATTTKQ GLNYQNTDAY LLKRIRIMGK YNHEKFIEEL HKWDYTGESK EL
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