| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_3047 |
|---|
| Symbol | |
|---|
| ID | 8430041 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | - |
|---|
| Start bp | 3244008 |
|---|
| End bp | 3246104 |
|---|
| Gene Length | 2097 bp |
|---|
| Protein Length | 698 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 645035303 |
|---|
| Product | glycyl-tRNA synthetase, beta subunit |
|---|
| Protein accession | YP_003192422 |
|---|
| Protein GI | 258516200 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
|---|
| TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.228214 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0284837 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGCTAAAG ACTTTTTATT TGAAATTGGT ACGGAAGAAA TCCCTTCCCG CTTTATAGCA
CCGGCCCTGG CGGAACTAAA GGAAATAACA GTCAAGGCTC TGGAAGAAAA CCGTCTTTCC
TACGGTAAAG TCAATACCTA TGGGACCCCG CGCCGTCTGG TACTTTATAT TGAGGCGCTG
GCTGAAGAGC AGGATTCCCT TCTCAGAGAA GTCAAAGGCC CGGCGGTTAA AGTAGCCTTT
ACTCCTGAGG GAGAACCAAC CAGGGCGGCT GTCGGTTTTG CCAAAAGCCA GCAGGTAGAC
ATCAAAGATC TGGTCAGGCG CCAGGTAGCT ACAGTAGAGT ATTTGTATGC TATTAAACAG
GAACTGGGCC GTCCTGCTTA CGAAGTTCTC ACAGAGTTGT GTCCTTTATT AATCAGCTCG
CTGCATTTTC CTAAACCTAT GCGCTGGGGA GATTTAGAGG TGCGTTTTGC CCGCCCGATT
CGCTGGCTGC TTGCTCTTTG GGGCGGAGAA ACGGTTAATT TCTCTTTTGC CGGTTTATCT
TCAGGAAAAG TAACTTTTGG CCACAGGTTT TTAAGCGGTC CTTTGGAAGT CGACAGTCCC
AAGGATTACC TGGCCAGACT GCGCAGCAAT TATGTGATAG TTGATATTGA TGAGCGGAGA
CAAATGATCT GGCAGCAGAT ACAAAATTTA GCCGAGCAGT CAGGAGGGGT GGTTGAGCCT
GATGAGGATT TACTGGAAGA GGTCTGCAAC CTTGTAGAGT ACCCTACTGC TTTATGCGGC
AGTTTTGAGG AAAAGTATTT GCATTTGCCA AAAGAAGTTT TAATCACCCC GATGCGCGAG
CACCAGAGGT ATTTCCCTGT CTTAGACAGT GAAGGCAGAT TGATGCCTAA ATTTATTGCT
GTCAGAAACG GTATTCATAA ATATCTGGAC ACGGTGAGGG CAGGTAATGA GAAAGTGCTG
AGGGCCCGCC TGGCCGATGC AGAGTTTTTC TTTGAGGAAG ATTTGAAAAC ACCTCTGGCG
GATAAGGTTG AGGGTCTGAA AAAGGTTGTT TATCAGGAGA GCCTGGGCAC AGTCCACGAC
AAAGTCAAGC GGGTAATCAA ACTGGCCGAT TACTTGAGCG ATCTTTTAAT CGTTGGCGCC
GCGGTAAAGG AGCAGATCAT GCGTGCTGCT GTACTATGCA AAGCTGATCT GGTGACTAAT
ATGGTTTATG AATTTACTGA ACTGCAGGGT ATTATGGGCC GGGAATACGC TTTGAAGTCG
GGTGAGGAGC CGGTTGTTGC TCAGGCCATC TTCGAGCATT ACTTGCCTCG TTTTGCCGGT
GATAGCCTGC CGGAAACTTT GCCGGGAAAA ATTTTAGCTA TTGCCGATAA ATTTGACACA
GTAGCCGGCT GCTTTGCAAT AGGCATTCAG CCAACCGGCT CACAAGATCC CCATGCCTTG
AGACGGCAGG CTTTGGGTAT ATGTCATATT ATTTTAAGCA GCGGCTTAAA AATTTCCTTA
AGCGCTCTGG TTACGGCAGC TTATGCAAGT TACTTGGAGC AGGAGCAGGT GCAGCTTAAG
CTTGGTTTGG ATGAACTGCT GGTGGAAATG TGGGTATTTT TCCAGATCCG CTTAAAAAAT
ATTTTTTCTG ATTGCGGGCT GGGTTATGAT ACTATAGATG CTGTGCTGGC TGCCGGTTTT
GATGATTTCA GCGATACCTG GGAGCGGGCC AGGGCACTGT CTCAATTCAG AAATGAGCCG
GCCTTCAGTG ATCTGCTGAC TGTTTTTAAC AGAGCCAATA ATTTATCCAA AAACGTGGAC
GTTGCAGAAA TTAAACCGGA ATTTCTGGTG GATGACTCTG AAAGAAATTT ATATGATCAT
TTTCTGGCCT TAAAAAAACA GGTTGCAGTT GAAATGGATA AGAAAAACTA CCTGGGTGTA
CTTAAAGCAG TTGCAGAAAT TCGGGAACCG TTGGGCAAAT TTTTTGATTC GGTTATGGTT
ATGGCGGAAG ACACGAATAT TCGTGATAAC CGGCTGGCAT TATTAAAGAG CCTGGCCGGC
TTAATGCAGT CAGTAGCTGA TTTTAGTAAA ATTGTTGAAG ACAAGAAAGT CGCTTAA
|
|---|
| Protein sequence | MAKDFLFEIG TEEIPSRFIA PALAELKEIT VKALEENRLS YGKVNTYGTP RRLVLYIEAL
AEEQDSLLRE VKGPAVKVAF TPEGEPTRAA VGFAKSQQVD IKDLVRRQVA TVEYLYAIKQ
ELGRPAYEVL TELCPLLISS LHFPKPMRWG DLEVRFARPI RWLLALWGGE TVNFSFAGLS
SGKVTFGHRF LSGPLEVDSP KDYLARLRSN YVIVDIDERR QMIWQQIQNL AEQSGGVVEP
DEDLLEEVCN LVEYPTALCG SFEEKYLHLP KEVLITPMRE HQRYFPVLDS EGRLMPKFIA
VRNGIHKYLD TVRAGNEKVL RARLADAEFF FEEDLKTPLA DKVEGLKKVV YQESLGTVHD
KVKRVIKLAD YLSDLLIVGA AVKEQIMRAA VLCKADLVTN MVYEFTELQG IMGREYALKS
GEEPVVAQAI FEHYLPRFAG DSLPETLPGK ILAIADKFDT VAGCFAIGIQ PTGSQDPHAL
RRQALGICHI ILSSGLKISL SALVTAAYAS YLEQEQVQLK LGLDELLVEM WVFFQIRLKN
IFSDCGLGYD TIDAVLAAGF DDFSDTWERA RALSQFRNEP AFSDLLTVFN RANNLSKNVD
VAEIKPEFLV DDSERNLYDH FLALKKQVAV EMDKKNYLGV LKAVAEIREP LGKFFDSVMV
MAEDTNIRDN RLALLKSLAG LMQSVADFSK IVEDKKVA
|
|---|
| |