Gene Dtox_3042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_3042 
Symbol 
ID8430036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp3238132 
End bp3238758 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content42% 
IMG OID645035298 
ProductSNARE associated Golgi protein 
Protein accessionYP_003192417 
Protein GI258516195 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.537249 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.212415 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCCGGC TGGAACCCAG GGAATTAATT TTTCACCTGC TGCAACATTA CGGTTATATC 
GGTCTATATT TATTGTTTAT AATTGACACT CTGGGTGTTT TTCTACCTTC TAAGACTATA
CTGATAATTT CAGGCTTTTT AGTCAGTCAG GGCTTTATTA AACACCTGCC ATTATTTATT
GCCGCACTGG CAGGCAGCCT GACCGGCTTT TTTACCGGCT ACCAGGTGGG CACAAAAGTA
GGTAAACCGT TTTTAGACAA ATATGGCAAG TGCATATATC TCACGCCTAA ACTGCTGAGA
AAAGCGGAGA AATGGTTTGA CGCCTACGGC ACAGCAGCAA TTCTAATAGC TTACTTTATA
CCCGGCTTAA GGCATATTGT ACCCTACCTG TCCGGTATAG CCCAAATGCC GGTCCGCAAA
GTCATGCTCT GCGCCTTCAG CGGGGCAACG CTCTGGGTTT TGACGTTTAC ATTAATAGGA
AGATTTTTAG GCAATAACTG GTCTACAATA ATAAATATAC TCAATAATTA TAGGTTAGAG
ATTGGTGGGA TTGCGGCAGC AATGGCCTTA GTGTCTTTTT TAGTAAGACG GGCTTTTGGG
AAAAACTACA ACAATAAGAG AGCATAA
 
Protein sequence
MIRLEPRELI FHLLQHYGYI GLYLLFIIDT LGVFLPSKTI LIISGFLVSQ GFIKHLPLFI 
AALAGSLTGF FTGYQVGTKV GKPFLDKYGK CIYLTPKLLR KAEKWFDAYG TAAILIAYFI
PGLRHIVPYL SGIAQMPVRK VMLCAFSGAT LWVLTFTLIG RFLGNNWSTI INILNNYRLE
IGGIAAAMAL VSFLVRRAFG KNYNNKRA