Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtox_3040 |
Symbol | |
ID | 8430034 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum acetoxidans DSM 771 |
Kingdom | Bacteria |
Replicon accession | NC_013216 |
Strand | - |
Start bp | 3236836 |
End bp | 3237405 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 645035296 |
Product | 2'-5' RNA ligase |
Protein accession | YP_003192415 |
Protein GI | 258516193 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1514] 2'-5' RNA ligase |
TIGRFAM ID | [TIGR02258] 2'-5' RNA ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.308422 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCCCA TACGTTTGTT TTGGGCAGTT AATCTCTCTT CGGAACTAAA GGCAAAGATT GCTGTGCTGC AGTCACAGCT AAAGAAGTGC GGGGCGGATG TTAAGTGGGT TGACGAGGAG AATTTTCATT TAACGGTAAA GTTTTTGGGC GACACTGAAC CGGAAATTGT ACCGGTTATG GTTAAAAAAA TGAAGCAAGA AGTAGGAGGC CTGGGGGTTT TTACTTTAAG AATCGAAAAA TTGGGGGTTT TCCCCGGCAA GGGATTGCCA AAAGTAATCT GGGCCGGAGT GAACGGGAAA AAGGATAAAT TTAGGAATTT ATATGACCGG ACGCAGCGGT CTCTCCGGAC TCTGGGCTTT GCGCCCGATA AAAAGCCTTT GTCGCCGCAC CTTACCCTGG GCAGGGTACG CTCAGCCCGT GGGACCAAAG AGTTAACGGC AGCTATGGCT TCTTTTAACA GCAGTAATTG TTTTTTAGGA GATGAGATTA TTGACTCTGT TGACCTTATG CGGAGCGAGC TTACCAGGAA TGGAGCAATT TATACTATAA TGGAAAGTAT TGTATTGTAG
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Protein sequence | MQPIRLFWAV NLSSELKAKI AVLQSQLKKC GADVKWVDEE NFHLTVKFLG DTEPEIVPVM VKKMKQEVGG LGVFTLRIEK LGVFPGKGLP KVIWAGVNGK KDKFRNLYDR TQRSLRTLGF APDKKPLSPH LTLGRVRSAR GTKELTAAMA SFNSSNCFLG DEIIDSVDLM RSELTRNGAI YTIMESIVL
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