Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtox_3036 |
Symbol | |
ID | 8430030 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum acetoxidans DSM 771 |
Kingdom | Bacteria |
Replicon accession | NC_013216 |
Strand | - |
Start bp | 3231531 |
End bp | 3232610 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 645035292 |
Product | RNA polymerase sigma factor RpoD |
Protein accession | YP_003192411 |
Protein GI | 258516189 |
COG category | [K] Transcription |
COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
TIGRFAM ID | [TIGR02393] RNA polymerase sigma factor RpoD, C-terminal domain [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0549205 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGGGATG AAAAGAAAGT AGAAAATATA AGAAGCTTGG TAGAGAAAGG CAAAAAGCAA GGCTACCTGA CTTACCACGA GATAATGGAT GTTTTGCAAA CTACTGAACT TACGCCGGAT CAGATTGATG ATGTTTATGA ACAGTTGTCC GGGATGGGGA TAGATCTCTT AGCCACAGAG CCTGAAATGG ATGAGGCGGC AGTAAAACCT GATGAAGACG TTGAAGTTGA TTTGAGTGTG CCGGAAGGTA TTGGCATTGA CGATCCGGTT AGGATGTATC TGAAGGAAAT CGGCCGGGTA CCTTTATTGT CCTCCGAAGA AGAGGTGGAA TTGGCCAAGC GCATGGAGAT GGGCGAGGAG GAGGCTAAGC GGCGTTTGGC TGAGGCGAAT TTACGGCTGG TGGTCAGCAT AGCCAAACGC TATGTAGGAC GGGGCATGCT GTTTCTGGAT TTGATTCAGG AAGGCAATAT GGGTTTGATT AAAGCAGTGG AGAAGTTTGA TTACCGCAAA GGCTATAAGT TCAGCACTTA TGCTACCTGG TGGATCAGGC AGGCGATTAC CAGGGCGATA GCCGATCAGG CCAGAACCAT CAGAATTCCC GTTCACATGG TGGAAACTAT CAACAAGCTG ATTAGAGTAT CCCGCCAGCT GCTTCAGGAA TTGGGTCGTG AACCAATGCC CGAAGAAATT GCTAAGGAAA TGAACATAAC TGAAGATAAA GTCAGGGAGA TTATGAAAAT TGCTCAGGAA CCGGTTTCCT TAGAAACTCC TATTGGTGAA GAAGAAGATT CCCATTTGGG CGATTTTATT GAAGATCATG ATGCCCGTGC TCCTGCTGAA GAAGCATCCT TTACCTTATT AAGGGAGCAG CTGGATGATG TGTTAAAAAC TCTTACTGAC AGGGAGCAAA AGGTTTTAAG ACTTCGTTTT GGTTTGGATG ATGGCCGTGC CCGAACTTTG GAAGAGGTGG GCCAAAAGTT CGGTGTAACC CGTGAGCGGA TCAGACAAAT TGAAGCTAAA ACACTGCGCA AGCTGCGTCA TCCCAGTCGC AGTAAGAAAT TAAAAGATTA TCTGGACTAA
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Protein sequence | MRDEKKVENI RSLVEKGKKQ GYLTYHEIMD VLQTTELTPD QIDDVYEQLS GMGIDLLATE PEMDEAAVKP DEDVEVDLSV PEGIGIDDPV RMYLKEIGRV PLLSSEEEVE LAKRMEMGEE EAKRRLAEAN LRLVVSIAKR YVGRGMLFLD LIQEGNMGLI KAVEKFDYRK GYKFSTYATW WIRQAITRAI ADQARTIRIP VHMVETINKL IRVSRQLLQE LGREPMPEEI AKEMNITEDK VREIMKIAQE PVSLETPIGE EEDSHLGDFI EDHDARAPAE EASFTLLREQ LDDVLKTLTD REQKVLRLRF GLDDGRARTL EEVGQKFGVT RERIRQIEAK TLRKLRHPSR SKKLKDYLD
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