Gene Dtox_3004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_3004 
Symbol 
ID8429994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp3204781 
End bp3205713 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content43% 
IMG OID645035257 
Producthypothetical protein 
Protein accessionYP_003192380 
Protein GI258516158 
COG category[L] Replication, recombination and repair 
COG ID[COG3649] Uncharacterized protein predicted to be involved in DNA repair 
TIGRFAM ID[TIGR01595] CRISPR-associated protein, CT1132 family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.638889 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAAAA CTAATAGAGT GTATGGAATT CTTGCCGTTG GTGCTTATAT GGCCAATTTC 
AATGCAGACC TGTCAGGATA TCCCAAAACG ACTACCGATA GTCATATCTT TGGCAGCGAT
AAAGCCCTGA AATATCCAAT GAAGCGCATG TGGCTAATGC AAGGTGACCC AATACTTTAT
ATTAAAAGCA TGCAAAGCAT GAAAAATAAA GAAGAAGGTG AAAAGATTCA ACCCAGGGAT
TTGAATGAGA GATATACGGA ACTTTTCGGG AACCTGGATG AAAAAACATC TTCTAAAGAG
GTTTTAGGCA AACTGTTTTC CGCCATAGAT GTCATGAATT TCGGTGCCAC CTTTGCCGAG
AAAAAACAGA ACATCAGCAT CACAGGGGCA GTGCAGATTA ACCAGGGGCG CAACCTTTTT
GAGGATACCC ATGTGCTGAC GCAGGAGATT CTTTCTCCAT TCCGCAATTC TAATGAGAAA
AGTGAGGGCA AGCTGGCTTC TACCATGGGG ACCAAGATTG TCACTGATGA AGCGCATTAC
GTATATTCTT TCTCAGTGAA TCCCGCCAAT TATAATGATT TTATCGGGCT GGCTGACGGC
TTTGAGGGTT ATACCGTTGA AGCGTATGAA AAATTTAAAT GGGCTGCCAG AGTAGCCACC
ACAGCTTTTA ATACTAATTC CAAAAGCGGC TGCGAAAATG AACTGGCCTT GTTTATTGAA
ATGAAAGAGG ATAGCCAATT ATACCTGGCC AATTTGGATC GCTATGTAAC GGTACGCAAG
AAGGAAGATC GGATTTTGTT TGACCTGAGC AAACTGGCAA ATTTCTTGGC CCCGCGCCAG
GAGGAAATCC AATTCGTGGA ACTTTACTGT AATCCGGTCA CTGTCGATGT AGAGTATGGT
TCGCTTAATT GCAGCGTTTA TTCCATTTAT TAA
 
Protein sequence
MQKTNRVYGI LAVGAYMANF NADLSGYPKT TTDSHIFGSD KALKYPMKRM WLMQGDPILY 
IKSMQSMKNK EEGEKIQPRD LNERYTELFG NLDEKTSSKE VLGKLFSAID VMNFGATFAE
KKQNISITGA VQINQGRNLF EDTHVLTQEI LSPFRNSNEK SEGKLASTMG TKIVTDEAHY
VYSFSVNPAN YNDFIGLADG FEGYTVEAYE KFKWAARVAT TAFNTNSKSG CENELALFIE
MKEDSQLYLA NLDRYVTVRK KEDRILFDLS KLANFLAPRQ EEIQFVELYC NPVTVDVEYG
SLNCSVYSIY