Gene Dtox_3003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_3003 
Symbol 
ID8429993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp3204028 
End bp3204768 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content44% 
IMG OID645035256 
ProductCRISPR-associated protein Cas5, Hmari subtype 
Protein accessionYP_003192379 
Protein GI258516157 
COG category 
COG ID 
TIGRFAM ID[TIGR02592] CRISPR-associated protein Cas5, Hmari subtype
[TIGR02593] CRISPR-associated protein Cas5, N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.577578 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGTC TGCGCTTCAC TCTTTCCGGT TCGGCGGCTT GCTTTCGACA GCCTGATGTT 
AACACTCTTG TTTATTTTAC CTATAACAAT ATCCACAAAG TTGCTCTGCT GGGCTTGCTG
GGAGCGGTTT TAGGATTAAG CGGGTACCGC AATGCCAAAC TCCACGGACA GGAGGATCCA
ATCTTTCCGG AGTTTTACGA GGTGCTTTCT TCCCTGCAGA TATCCGTAGT TCCCAATACC
AAAAACGGTT ATTTTACTAA AAAAATACAA TATTTTAATA ACAGTGTGGG GTATGCGTCG
AGGGAAAAAG GCGGTAATTT GCAGGTGCGG GAACAATGGC TGGAAAATCC CAGTTGGACT
ATTTTTCTGA AGCAGAATAA TTTGGATGAT ATTGTTTGGG ATAAGCTTTG CAGCAGTCTT
TTGGAAGGAC GATGCGTTTA TCTTCCCTAT TTAGGCCGCA ATGATTTTCC AGCCCAGATT
GAGGATATGC ATATGGTGGA GCTTTTTCCT TCCAGGCAGT CCCGTATTGA TTCGCTGTTT
TTATATGATG GGGATCTCAA TGCTTTGGGT GGAGGCGGGC CTGCGCAATA TTTATTTGTG
GAAACTGCTC CGACCGGTTT AGTGCCTAAG TACAATTTTT ATGAATTTGG ACGCTATATT
TTTACTAATT GCACCGTTCC TGAAGCGGTG CTGCCTCCCC TGCTATATGC GGACGGGGAA
CTGCAGTATT GCTTTTATTG A
 
Protein sequence
MKSLRFTLSG SAACFRQPDV NTLVYFTYNN IHKVALLGLL GAVLGLSGYR NAKLHGQEDP 
IFPEFYEVLS SLQISVVPNT KNGYFTKKIQ YFNNSVGYAS REKGGNLQVR EQWLENPSWT
IFLKQNNLDD IVWDKLCSSL LEGRCVYLPY LGRNDFPAQI EDMHMVELFP SRQSRIDSLF
LYDGDLNALG GGGPAQYLFV ETAPTGLVPK YNFYEFGRYI FTNCTVPEAV LPPLLYADGE
LQYCFY