| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_3000 |
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| Symbol | |
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| ID | 8429990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum acetoxidans DSM 771 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013216 |
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| Strand | - |
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| Start bp | 3200114 |
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| End bp | 3201121 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 645035253 |
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| Product | CRISPR-associated protein Cas1 |
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| Protein accession | YP_003192376 |
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| Protein GI | 258516154 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1518] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1
[TIGR03641] CRISPR-associated endonuclease Cas1, HMARI/TNEAP subtype |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0143403 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGTAAGA GCAGTGATAC CCGGTATATT TTTTCAGCCG GAGATTTGTA TCAAAAGGAT
TTTTCCATAG CATTCCGTAA AGAAGATGGT AATTTTTATA TTCCCATCAA GGATACGCGG
GAACTATACT GCTTTAATGA TATCACCCTG AGCACAAAGT TGCTTCAACT TTTGGCCAAA
GCCGGTATTG TGGTGCATTT CTTCGGTTAT TATGAAAATT ATATAGGGAC ATTTTATCCC
AAAGAGCAAT TATTAAGCGG GAGGCTGACG GTTGCTCAGG CTTTGGCTTA TGAGCAAAAC
AGGTTGCAGA TCGCGGGACA AATTATTAAG GGAATTGCTA AAAATACTTA TTTTGTACTT
TACCATTATT ACCGACATGG GAAAAGTGAA CTAAAAGACT TTTTGGACTG GTTGCGTAAG
GATGTTTCGC GCTTGGTCGA TTCTGTCGGC AATATTAAAC AGCTACTGCG TATTGAAGGG
GAAATATGGG CCCGGTTTTA TCAGTCATTC CGGGTATTTC TGCCCGAGTC TTTTGCTATG
AACAAAAGAG TAAAACGTCC GCCCGATAAT CCCATTAACG CACTGATATC TTTTGGTAAT
ACCTTGTTGT ACACAAAAAC CATTACGCAA ATTTTCCATA CCCACTTGAA TCAAACTATT
TCCTTCTTGC ACGAACCGGC GGAACGACGA TTTTCCTTAA GCTTGGATTT GTCGGAAGTA
TTTAAACCGG TATTGGTTTG CAAAACTATT TTTGATTGTG TAAATAATCG CAAAATTATG
GTAGAAAAGC ATTTTGACAA AAAGCTGAAT TATGCCCTGC TAAACGAGCT TGGGCGCAAA
GTGTTTATCG AGGCTTTTGA AGAACGGTTG AACCAGACAT TTGAACATCA AACCTTAAGA
AGAAGGTGTA GTTACAAACA AGCTATCAGG TTAGACGGAT ATAAGCTCAT TAAGCATATT
TTGGAAGGAA AAAACTTCGT TCCTTTTTGC ATGGAGGATA AAAAGTGA
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| Protein sequence | MGKSSDTRYI FSAGDLYQKD FSIAFRKEDG NFYIPIKDTR ELYCFNDITL STKLLQLLAK
AGIVVHFFGY YENYIGTFYP KEQLLSGRLT VAQALAYEQN RLQIAGQIIK GIAKNTYFVL
YHYYRHGKSE LKDFLDWLRK DVSRLVDSVG NIKQLLRIEG EIWARFYQSF RVFLPESFAM
NKRVKRPPDN PINALISFGN TLLYTKTITQ IFHTHLNQTI SFLHEPAERR FSLSLDLSEV
FKPVLVCKTI FDCVNNRKIM VEKHFDKKLN YALLNELGRK VFIEAFEERL NQTFEHQTLR
RRCSYKQAIR LDGYKLIKHI LEGKNFVPFC MEDKK
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