Gene Dtox_2964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_2964 
Symbol 
ID8429954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp3148016 
End bp3148642 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content45% 
IMG OID645035219 
ProductNLP/P60 protein 
Protein accessionYP_003192342 
Protein GI258516120 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAGAG CTAAAATAAT GTTTACTTCC CTTGCCCTGG GAATATCTCT TTGTATTTTA 
CCGGGTATTT CTTTTGCGGA AACTTATACA GTTAAGCCGG GAGATACTCT CTGGAAAATT
TCCCGGGATT ATGGTACTAC CGTAAGCAAT ATTCAATCAT TGAACAATCT TAATTCTGCG
TTGCTGCACC CGGGACAGCA GCTAGTGATT GGAGGTCAAG GCCAGAGTCC CGCCCAGCCA
CAGCAGCAGG TATCCAGAGG TTTGGGCCGG GTAAGTACAG TACTAAGTTT TTCAAAATCT
CTGCTCGGTG TGCCGTATGT TTCAGGAGGA TCGTCGCCAA GTGGTTTTGA TTGCTCAGGT
TATGTGAAAT ATGTGTTCGG TCATTTTGGT ATAAACTTGC CCAGAACGGC TGGAGAACAG
TATAATGCGG GTCTAAAAGT TTCTTCCGCA GAAGCCAGAC CCGGTGATCT GGTCGCTTTT
AAAACAGGCG GGTATATTTC GCATGTTGGG ATATATCTTG GCGATAGTCA ATTTATCAGT
GCGACATCCA GTAACGGTAT TGACATTACT TCTGTACATG GTCCTTATTG GGGCAGCCGT
TTTTTAGGAT TCAGTCGAAT AATGTAG
 
Protein sequence
MSRAKIMFTS LALGISLCIL PGISFAETYT VKPGDTLWKI SRDYGTTVSN IQSLNNLNSA 
LLHPGQQLVI GGQGQSPAQP QQQVSRGLGR VSTVLSFSKS LLGVPYVSGG SSPSGFDCSG
YVKYVFGHFG INLPRTAGEQ YNAGLKVSSA EARPGDLVAF KTGGYISHVG IYLGDSQFIS
ATSSNGIDIT SVHGPYWGSR FLGFSRIM