| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_2953 |
|---|
| Symbol | |
|---|
| ID | 8429943 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | + |
|---|
| Start bp | 3134485 |
|---|
| End bp | 3136353 |
|---|
| Gene Length | 1869 bp |
|---|
| Protein Length | 622 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 645035208 |
|---|
| Product | GerA spore germination protein |
|---|
| Protein accession | YP_003192331 |
|---|
| Protein GI | 258516109 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATATGA TTAATAAACT CCTTAAGTAT ATCAGTTTCC ATGAAAGTTC AGCACAGGAA
GAGTTTATTC TGTCTGAAAA CAATAAAAAA AATAAACTAG GTTCGTCTCA CACCGAAAAT
GTATCTACAG AATCAGAAAA AAGCTTACCG TCTGATGAAC GTATTAAAGA AGATAATAAA
AGCGGACATT TAGCCAATCA AAATAAAATA AACAACATCA ATAATAAGGA TAATATATCA
GCTGTCAAGC GTAAGATTAG AAAACCAATC AGCCTTTCTG AGTTGAAAGT GCAAAAAAAT
ACAAAACAAG ATCAACATGA AGAACCTGGC GACACTTGTC AGATAAAGAT TGACACTTGC
CTGGAAACTA ACAAAAAAAT ACTCAAGCTT CTCTACGGCC TGCCTAAGAA TAAGGATGTT
GTTATACGCG AATTCACTTT AGGTACAACA CCTGAGATAC AAGGTTTTCT GGTTTTTATT
GACGGGTTAA CAGATAAAGC CCTGCAAGAT ATGTTGTTAA AAACTTTAAT GCTGCAGACA
AAGGAAAAGC ATCTCGGCCC TGATGCAAAT AATGCCGAAT TTATGATAAA GAATCTAATT
CCCGGCAATC AGGTTAATAC CTATAATAAT TATCGAAAGG TTTTGGATGC GATAAATTAC
GGTGAAACAG CCATTTTTTT AGAAAATTTA TCTCATGCAA TTACAGTAGA AACTAAAGGC
TGGGAGCACC GTGCCGTAAG CAGAACCATG GTTGAGCAAA TTGTACGGGG CCCACAGGAA
GCATTCACTG AAACACTCAG GGCAAATACT GCTTTAATCA GGAAAATGCT TAAAAACGAA
AACCTGATCA CTGAGATGAT TCCTGCCGGC GTGCGAAATC ACGGTAATGT AGCCATAATG
TACATAAACA ATTTGGCCAA CCCAATGCTG GTAAAAGAAG TGAAAAAACG AGTGGCCAGT
ATAAAAACCG ATCTGCTTAC AGATAGCGGT CTGCTGGAAC AATTTATTGA GGATCATCCT
TACAACCTCA ACCCTCAAGT AATTGCCACG GAAAGACCGG ACCGGGTAAC AGCACTACTG
ATAGAAGGCC GGGTTGCTAT TATTGTTAAC GGGAGTCCTT TTGTTCTGAT AGTGCCTACA
ACCATGTTTG ATTTGCTTCA TACAGGAGAA GAAAACTATT TGCGCTGGCA ATACGGTACT
TTCCTGCGAT ATATCAGAAC CCTGGCTTTC TACATAGCTT TTTTATTGCC TGGAGTTTAC
CTTTCCATCG TTCTTTTTCA TCATGAAATG ATCCCCACCG ACCTGCTTTT AGCCATTGCA
GGCAACAGGG AGAAAGTACC TTTCCCATCA GTAGTCGAGG TACTGCTGAT GGAATTATCT
TTTGAGATGA TCAGGGAGGC GGGTCTTAGA CTGCCCGGTA TGATGGGATC AACCATAGGT
ATTGTGGGGG CTTTGATTTT AGGACAGGCA GCAGTCCAGG CTAATATAGT CAGTCCCATT
TTAGTTATTT TAGTTGCCGT TACCGGCTTA GCCTCCTTTG CTATACCCAA TTACTCCATG
TCCTTTGCAT TGCGCATCTA TAGATTTTTT TATATCGTTC TTGGCGCCAG CATGGGTTTT
TTCGGAATAA CACTTGGACT GAGCGTCCAT ATTTTTTTAA CGGTTAACAT GAAATCTTTC
GGCGTACCTT ACCTGACGCC AATGGGTCCA CGTGTAGCGC CGGGAACAGA CGTAGTTACG
CGATTGCCGC TATTCTTCCA GGAAAAAAGA CCGGACTACA TAAATCCATT GGATAAAATC
CGACAGCCGG AAATTTCTCG CGGTTGGATC AAAAACCGGG AGGCAGGGGA AGATGAAGAA
ACAAAGTAA
|
|---|
| Protein sequence | MNMINKLLKY ISFHESSAQE EFILSENNKK NKLGSSHTEN VSTESEKSLP SDERIKEDNK
SGHLANQNKI NNINNKDNIS AVKRKIRKPI SLSELKVQKN TKQDQHEEPG DTCQIKIDTC
LETNKKILKL LYGLPKNKDV VIREFTLGTT PEIQGFLVFI DGLTDKALQD MLLKTLMLQT
KEKHLGPDAN NAEFMIKNLI PGNQVNTYNN YRKVLDAINY GETAIFLENL SHAITVETKG
WEHRAVSRTM VEQIVRGPQE AFTETLRANT ALIRKMLKNE NLITEMIPAG VRNHGNVAIM
YINNLANPML VKEVKKRVAS IKTDLLTDSG LLEQFIEDHP YNLNPQVIAT ERPDRVTALL
IEGRVAIIVN GSPFVLIVPT TMFDLLHTGE ENYLRWQYGT FLRYIRTLAF YIAFLLPGVY
LSIVLFHHEM IPTDLLLAIA GNREKVPFPS VVEVLLMELS FEMIREAGLR LPGMMGSTIG
IVGALILGQA AVQANIVSPI LVILVAVTGL ASFAIPNYSM SFALRIYRFF YIVLGASMGF
FGITLGLSVH IFLTVNMKSF GVPYLTPMGP RVAPGTDVVT RLPLFFQEKR PDYINPLDKI
RQPEISRGWI KNREAGEDEE TK
|
|---|
| |