| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_2931 |
|---|
| Symbol | |
|---|
| ID | 8429921 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | + |
|---|
| Start bp | 3112087 |
|---|
| End bp | 3113313 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 645035187 |
|---|
| Product | lysine 2,3-aminomutase YodO family protein |
|---|
| Protein accession | YP_003192310 |
|---|
| Protein GI | 258516088 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1509] Lysine 2,3-aminomutase |
|---|
| TIGRFAM ID | [TIGR00238] KamA family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0000971208 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.769663 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGATC AAGAACATGT TAATTCTATG AAAAGGGCCA AGGAACTAAA AAGTAAAATA
AATGATTATT TAAATGCTCG GGATAATATT CAAACAGGGC TTGAACGGAT TGAGGAAAAC
TCTCAAACCA AAAGTAAAAT AATAACGACT CTCAAGGCCA CTGATAAGGA CTGGTCAAAT
TGGAAGTGGC AAATTAAAAA CAGGTTCAGT AATGTTGAAC AACTGCAAAA AATCTTAAAT
ACCTGCCCTC AACTGGAAGA TATAAAAAAA GTTGAACGAG TATATCGCTG GGCAGTTTCA
CCTTACTATT TGAGTCTGTC CGCTGTAGAC AACGTCAACT GCCCTATTAG AAAACAGTTT
ATCCCCAGCA TATTGGAACT GCAGGATGAA CTGGGCTTGA GCGATCCGGT TGATGAAAAG
AATACCTCTC CTACGAAAGC AGTGGTAAGG CGCTACCCGG ACAGGTTAAT TATCAAAGTT
ACCAACCAGT GCGCCTCCTT TTGCCGGCAC TGTCAGCGCA AAAGGACAAT TGGCAAACAG
GATTTGCATA CAAGCAGCGG GAACATTGAA AAAGCGGTAG ACTACATTAA AAAAAATCCT
GAAATCAGGG ATGTTTTGAT TACCGGAGGT GACGCTCTTT TATTGAGCGA CAAAAAACTG
GATTGGCTGC TTACAGAATT AGATAACATT AATCACGTAG AAATCAAGAG AATCGGCACA
CGTGTCCCGG TGACCCTGCC TATGAGAATT ACAGAAAAAT TATGCGGCAT ACTCGGCAAT
CATCCCCCCC TCTATATCAA TACACAGTTT AACCACCCGC TGGAAGTTAC GCCTGAGGCA
GCAACCGCTT GCAATAAGTT GATTCAAGCA GGTGTGGTTC TGAGCAACCA GAGTGTTTTA
TTAAAAGAAA TCAACGATAA TCCCCATATA ATAAAAAAAT TAAACCAGGA ATTGCTTAAA
ATCAGGGTAA GACCATATTA TTTATTTCAC GCCATGCCTG TCAAAGGAAC ACGGCACTTT
TCCACAAAAC TATCAGTAGG CTTGGAAATA ATGGAGAAAC TAAGAGGTTA TACCTCAGGA
CTGGCTATTC CAAGCTATAT AGTAAATGTC AACGGCGGAT TGGGTAAAGT CCCTATTCAA
CCTCAATACC TGTTTTTCAA CGAACATAAT GAGATTACAC TGCGCACCTG GGAAAATAAA
CTGGTTGCCT TTATTGAAAA AAGCTAG
|
|---|
| Protein sequence | MNDQEHVNSM KRAKELKSKI NDYLNARDNI QTGLERIEEN SQTKSKIITT LKATDKDWSN
WKWQIKNRFS NVEQLQKILN TCPQLEDIKK VERVYRWAVS PYYLSLSAVD NVNCPIRKQF
IPSILELQDE LGLSDPVDEK NTSPTKAVVR RYPDRLIIKV TNQCASFCRH CQRKRTIGKQ
DLHTSSGNIE KAVDYIKKNP EIRDVLITGG DALLLSDKKL DWLLTELDNI NHVEIKRIGT
RVPVTLPMRI TEKLCGILGN HPPLYINTQF NHPLEVTPEA ATACNKLIQA GVVLSNQSVL
LKEINDNPHI IKKLNQELLK IRVRPYYLFH AMPVKGTRHF STKLSVGLEI MEKLRGYTSG
LAIPSYIVNV NGGLGKVPIQ PQYLFFNEHN EITLRTWENK LVAFIEKS
|
|---|
| |