Gene Dtox_2873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_2873 
Symbol 
ID8429862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp3053861 
End bp3056239 
Gene Length2379 bp 
Protein Length792 aa 
Translation table11 
GC content47% 
IMG OID645035137 
Productprotein of unknown function DUF214 
Protein accessionYP_003192261 
Protein GI258516039 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4591] ABC-type transport system, involved in lipoprotein release, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.646007 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTCT TGAGCAGAAA ATTATGTCGC ACCATCATAA ATACCAGAGG GCAGTTCCTG 
GCAGTTGTAG CAGTTGTTAT GGTAGGTATC TGTGTTTATA TTTCCATGTC CACTGCTTAT
TATAATATGA GCAGGTCTCA GGAGATTTTT TACGAAGCAA CTAATTTTGC CGATTATTAT
TTCCAGGTAG TCAGAGCACC CGGTCAAATC GTCAAACAAA TTGAGTCGAT ACCCGGGGTA
ACCAGGGTTA CGGGGCGAAT ACAAAAGGAT GTGCCGCTGC TCAAAGAGGG ACAGCAAAGA
GCCACCGCAC GGTTGATCAG TTACCCTTTG CCCATGGATA ATGAAGTAAA CCGGCTTGAT
TTGCAGCAGG GGCGTCTTTT TGAAAAATAC CCCCAGAGCG GTGGAATTGA AATCTTAGCT
GATCCTCAAT TTGTCAAAGC CAATAACCTT TCCTACGGCA GTATGGTAGA CATTGTGGCT
GAGGGTAAAA AGGTTCCATT AACCCTGGTG GGCAGCGCCA TCAGCCCTGA GTTTATTATC
AACATGAAGG ATGCGGCCAC ACTCATGCCG GACCCTAAAA CCTTTGGCAT TATCATGCTG
CCCCAGAACC AGGCTGAGCA AATTTTGAAC CTGTCCGAGC AAATAAACCA GGTGGTTTTA
AACCTGGCTC CCGGAGCAGA TGAGAAATCA GTGGTGGAGA AGGTTAAAGC TGTTTTGGAG
CCATACGGCA ATCTGGCCTC TTACCCGCGT AAAAACCAGT TGAGTCACAC GGTTTTGCAG
GGTGAACTGA ATAATTTGCA GGCGCTGGCC AGATTTATGC CGGCCATATT TTTAGGTGTT
GCTGCCGCCA TCCAGTTTAT CATGCTGGGC AGGATGCTCA AAGCCCAGCG TTTGCAAATA
GGAGTTATGA AAGCATTGGG TTACGGAAGT GGACAAATCA TGCTGCATTA CACTTGTTAT
TCTCTGGCTG TGGCTTTTGC CGGGGCTTTA TTGGGCACCT TGACGGGGGT ATTGCTGGCC
TCGGTTTTGT CTCAGGTCTA TACACAGTAT TTTAACTTGC CGGAAACCAT TGGATCACTG
AATTTAAAAG CCATTTTATA CGGTTTTATA CTCAGTTTGG GAGTCAGCCT GCTGGCCGGG
CTAAGCGCTG CCCGGGCAGT TATATCCATT AACCCGGCTG AATCCATGCG CCCTGAGCCT
CCCAAAGGAA AGGGAAAAAT ATTTCTTGAG GATTGGGCTT GGTTATGGAA CAGACTGGGT
GCAACCTGGA AGATGAGCAT AAGATCTCTC GGGCGAAAAT GGGGCCGCTT TGCCATTACC
CTGTTGGGCG TGGTTTTTGC TGTAGCTCTC TTAGTGCTTT CACTTTTTTC GAATGATTCT
GTTAATTATT TAATAAATAA GCATTTTTAT CAGGAGCAGC ATTACGATTT ACTGGTCCGT
TTCGGTACTC CGGTTAAAGA GGCTGAACTG CTTAACCTTT CCCGCCTGGA AGGGGTAATA
AAGACAGAGG CCATTTTTGA AATCCCGGTA AAGCTGCATT TTAAAGGGCG TTCAGAGGAC
GATTCTCTGC AGGGGTTGCC CGCGGGATTA ACTCTAAAAG AATTAACCGA CGATACGGGA
AAGCCCTTGC ATTTACCGGA GGAAGGCATT TTGATCAGCC GGAGGGCGGC AGACAAACTG
GGCGCGGAGA CCGGTGACGT TGTAGAGGCG GAAACGCTGT TAAGCCTCGG TCCTTCTCAT
CGAGTCGGTT TGAAAGTAAT GGGTGCAAAC CGACAGCTTG TCGGAAGCGC CTCATACATC
AGTATTGAGC AGGCCAACCT GATTCTGCGG GAGAGGGGTC TGGTTACAGG AGCTATGTTG
AAAGTTGATC CCGGCAGAAT TACGCTGTTA GAAGAAGAAT TAAATGAAAT GACCAATGTT
TCTTCCATCT CCAGCTTGCG CAAAGAACTG AACAACTTGA ACCAGAACCT GGACAGTATG
ATTTATTCAA TGTCTGTTAT GGTTGCTTTT GCTGTCCTGT TGGGTTTTGC TCTTGTTTAT
AATTCGTCGG TAATCAGCTT TGCCGAGCGT AAAAGAGAAC TGGCCTCACT GAGGGTAATT
GGTTTTACCT CTGGGGAGGT ATCCGGACTC CTGCTGAAAG AAACCCTCTT GCAGTCAATA
CTGGGAGTGA TCCTGGGGCT GCCTTTCGGT CGCCTGATGA CCGGGTGGTA TATTAAGGCT
GTCAGTACTG ATCTTTTTAC GTTACCCGTC ATTGTTTCTC CTCAAACCTA TTTTTTCTCT
GCCATGGGGG GAATATTTTT TATAGCTTTG GCTCACCTTT TTGCGGTCAG AGGGATTAAA
AAACTGGATT TGTCAGAGGT ATTGAAAAAC AGAGATTAA
 
Protein sequence
MSVLSRKLCR TIINTRGQFL AVVAVVMVGI CVYISMSTAY YNMSRSQEIF YEATNFADYY 
FQVVRAPGQI VKQIESIPGV TRVTGRIQKD VPLLKEGQQR ATARLISYPL PMDNEVNRLD
LQQGRLFEKY PQSGGIEILA DPQFVKANNL SYGSMVDIVA EGKKVPLTLV GSAISPEFII
NMKDAATLMP DPKTFGIIML PQNQAEQILN LSEQINQVVL NLAPGADEKS VVEKVKAVLE
PYGNLASYPR KNQLSHTVLQ GELNNLQALA RFMPAIFLGV AAAIQFIMLG RMLKAQRLQI
GVMKALGYGS GQIMLHYTCY SLAVAFAGAL LGTLTGVLLA SVLSQVYTQY FNLPETIGSL
NLKAILYGFI LSLGVSLLAG LSAARAVISI NPAESMRPEP PKGKGKIFLE DWAWLWNRLG
ATWKMSIRSL GRKWGRFAIT LLGVVFAVAL LVLSLFSNDS VNYLINKHFY QEQHYDLLVR
FGTPVKEAEL LNLSRLEGVI KTEAIFEIPV KLHFKGRSED DSLQGLPAGL TLKELTDDTG
KPLHLPEEGI LISRRAADKL GAETGDVVEA ETLLSLGPSH RVGLKVMGAN RQLVGSASYI
SIEQANLILR ERGLVTGAML KVDPGRITLL EEELNEMTNV SSISSLRKEL NNLNQNLDSM
IYSMSVMVAF AVLLGFALVY NSSVISFAER KRELASLRVI GFTSGEVSGL LLKETLLQSI
LGVILGLPFG RLMTGWYIKA VSTDLFTLPV IVSPQTYFFS AMGGIFFIAL AHLFAVRGIK
KLDLSEVLKN RD