Gene Dtox_2828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_2828 
Symbol 
ID8429817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp2987121 
End bp2988107 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content38% 
IMG OID645035092 
Productinner-membrane translocator 
Protein accessionYP_003192216 
Protein GI258515994 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTACAG CTTTCATGAT AGACATACCT CTTATGGGAT TGCTTAATGA CTCTTTAAAC 
AGGCTCTTCA TGAACGGTGT ACTGGTATTA TCTCTAATAC CCATGTTGAA TTCAGGAGCC
GGAATAAACT ATGGGTTACC GATTGGTATT AGCGCGGGCT TACTTGGCAT GTGTCTGAGC
GTCAATTTAA AACTAACAGG TTATATAGGT TTTCTTGCAG CTGTTACATT CTCTTTACCC
ATAAGTATTG TATTTGGTTA TAGTTATGGT ATGGTTTTAA ACAAACTTAA GGGTAAAGAG
GAAATAGCAG GTGTCTTTAT CGGCTTTTCT TTTGTATTCA TTATGAGTCT ATTCTGGTCT
ATAGCCCCCT TTAACAATCC TCAGATGCTG TGGCCTATCG GTGGACATGG CTTACGACCG
ACTATCGGTC TAAACAATTA TTTTGCAAAA ATATTGAACA ATCTATGGCT AATTAACATA
GGGCAATTCA AAATATCCAT CGGTTTCCTG ATAACCTTTT TGATATTATG TTTGATGGTT
TACTTATTTT TTAAGACAAA AATCGGTTTA GCCATTTCCG TTACCGGTGA AAATGAAACT
TTTGCACGTT TAGCCGGTAT AAATGTGAGC GCAATGAGGA TTCTGTCCAC TGTTTTGTCA
ACAGCGCTGG GGGCAGTTGG TATTTGTGTT TACGCACAGA GTTACGGCTT TATTGAATTA
TACGAAGCAC CTTTGATGAT GGCATTCCCT GCTGCTTCAG CTATTTTAAT TGGCGGCAGC
ACGGGAAGAA AAGCCTCTGT TCGAAATGTC ATTATAGGCA CATTCTTGTT TCAGTCTGTT
TATGTTATAA CCGGTCCGGT AGCTAATACT ATGTTAGCTC CGGGAGTTTC GGAAATACTC
CGCACAGTAA TTACAAACGG CATTATTCTA TATGCTCTTC TCTATGAGGG AGGAAAGACA
TCAATTGAAC AAAAATATTA TTACTAA
 
Protein sequence
MVTAFMIDIP LMGLLNDSLN RLFMNGVLVL SLIPMLNSGA GINYGLPIGI SAGLLGMCLS 
VNLKLTGYIG FLAAVTFSLP ISIVFGYSYG MVLNKLKGKE EIAGVFIGFS FVFIMSLFWS
IAPFNNPQML WPIGGHGLRP TIGLNNYFAK ILNNLWLINI GQFKISIGFL ITFLILCLMV
YLFFKTKIGL AISVTGENET FARLAGINVS AMRILSTVLS TALGAVGICV YAQSYGFIEL
YEAPLMMAFP AASAILIGGS TGRKASVRNV IIGTFLFQSV YVITGPVANT MLAPGVSEIL
RTVITNGIIL YALLYEGGKT SIEQKYYY