Gene Dtox_2808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_2808 
Symbol 
ID8429797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp2964371 
End bp2965513 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content44% 
IMG OID645035072 
ProductABC-2 type transporter 
Protein accessionYP_003192196 
Protein GI258515974 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID[TIGR00025] ABC transporter efflux protein, DrrB family 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.514512 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGAGCT TTAGTATTAT ACGCTTTTGG GCAGTATTGA AAAAAGAATT TATCCAGATT 
AAACGGGATA AGCCAAGTGT CATTATGGCA GTTGGTATGC CGGTGATTCT CCTCTTACTC
TTTGGTTATG CTGTAAATAC AGATATTGAT CACCTGCCCA CTGTGGTATG GGATCAGTCA
AATAGCCTTG ACAGCAGGGA ATTTATTACT GCCCTGCGCA ACTCAACTTA TCTGGACCCT
GATTACTATG TTTACGGTTA TAAGTCAATT ACCGGCTATT TAGACAGTGG GGAAGCCAGG
GTGGCAGTTA TTATACCGCC TGATTACGGT GAGGCAATTC AGGCCGGAGA GCAAGGCGTT
ATCCAGGTTC TGGTAGACGG CTCCGATCCT ACGGCCGCAC GTGCGGCAAT GTCAGCAGTG
CAGCTTGTGG GTATTAATAA GGCCTGGGAA GTTCAATCCT CCAGGTTGGG TAAGCAAACC
GGTGCGACTG TTATTAATAT GCCGGTTAGA GTAGAAACTC GCGTTTGGTA TAACCCTGAT
ATGAAATCAA CTGTTTTTAA TATCCCGGCA CTGATCGGGC TAATTCTCCA AAACGTCATT
GCCATGTTAA CGTCTTTTTC GATGGTGCGT GAAAAGGAGC GGGGAACGTT GGAGCAAATT
GTGGTAACGC CAATCCTCCC TTCTGAGTTG CTGTTAGGCA AGCTGCTGCC TTTTGTAGCC
ATCGGCTTTG TTTCTCTGAC TTCTGTCCTG CTTATGGGTA TTTACTGGTT TGGCGTGCCG
CCTAAGGGAA GTGTTTTGCT GCTCTTTGTT TTGGCCATAC TTTTCTTAAT TACCGTGCTC
TCAATTGGAC TACTTATTTC TACTATTTCC AAAACCCAAC TGCAGGCTAT GCAAATGACA
TTTCTTCTTT TACTGCCTTC AGTTTTATTA TCAGGCTTTA TGTTTCCCAG GGAAACCATG
CCGCCGTTTT TGAAAATGCT GGGAGCTCTT TTGCCGCTGA CCTATTTTCT TGATATAGTA
AGAGGCATAT TCTTAAAAGG GATCGGTTTG AAGTATTTGT GGCGGGAAAC ACTTGCGCTA
GTTGTATTTG CTTCGGTATT GCTTACAGTG TCAATGGTGA AGTTTAAAAA GAATGTTGGT
TAG
 
Protein sequence
MRSFSIIRFW AVLKKEFIQI KRDKPSVIMA VGMPVILLLL FGYAVNTDID HLPTVVWDQS 
NSLDSREFIT ALRNSTYLDP DYYVYGYKSI TGYLDSGEAR VAVIIPPDYG EAIQAGEQGV
IQVLVDGSDP TAARAAMSAV QLVGINKAWE VQSSRLGKQT GATVINMPVR VETRVWYNPD
MKSTVFNIPA LIGLILQNVI AMLTSFSMVR EKERGTLEQI VVTPILPSEL LLGKLLPFVA
IGFVSLTSVL LMGIYWFGVP PKGSVLLLFV LAILFLITVL SIGLLISTIS KTQLQAMQMT
FLLLLPSVLL SGFMFPRETM PPFLKMLGAL LPLTYFLDIV RGIFLKGIGL KYLWRETLAL
VVFASVLLTV SMVKFKKNVG