Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtox_2746 |
Symbol | |
ID | 8429732 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum acetoxidans DSM 771 |
Kingdom | Bacteria |
Replicon accession | NC_013216 |
Strand | - |
Start bp | 2901535 |
End bp | 2902401 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 645035020 |
Product | shikimate 5-dehydrogenase |
Protein accession | YP_003192147 |
Protein GI | 258515925 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0169] Shikimate 5-dehydrogenase |
TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0290691 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.306598 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTTTTC TAAACATTAC CGGAGCTACA AAGATATGCG GGATTATAGG TGACCCGATA GAGCACTCCT TTTCTCCTTT TATGCATAAT GCTGCTTTTG CTGCTTTAGG TTTAGATTAT GCTTATGTTC CTTTTCATGT AAAAAGAGAT AATTTGTCCG ATGCTCTAAA GGCAGTAAGG GCTTTAAATA TAAAGGGAAT TAATGTTACT GTGCCTCATA AGCAAGCAGT TTTGCAGTAT TTGGATGAAA TTTCATCATC TGCCTCTCTT ATTGGTGCAG TTAATACCGT TGTTAATAAT CATGGGTATT TAGTTGGTTA CAATACTGAC GCTCCCGGCT TTGTCCGATC TTTGAAGGAA CAGGCGGGAT TTTCACCGGA AGGAGCCGGC ATATTTATTC TGGGAGCCGG TGGTGCTGCA CGTGCAGTTG CAGTTGAGTT GGCGTTGTCT GGGGCCTCCT TAATTCATAT AGCTAACCGA ACAGTTGATC GTGCGGAGGA AATTGCCGGG TTAATTGAAG GAAATACAAG CTGTTCCTCA AAAGCTTATT CACAGCAAGA TTTATCTCTA AGCAAATTAA TGAAAGACGC TGATTTAATA ATCCAGACTA CTTCTCAAGG CATGTATCCG CGGGTAACGG AGCTGCCGGC TTATCCTCTG GATGCATTTC ATGCCGGGCA GTTGGTGTGT GATTTGATAT ATAATCCAAG GCAAACTATA TTTTTGCAGA TGGCGGAACA GTGTGGTGCT AAGACTTTAA ACGGCATGGG TATGCTTTTA TACCAGGGGG CTCTAGCCTT TGAATACTGG ACGGGTTTGG CTTCTCCGGT GGAAATAATG GATCAAGCTT TAAGGCAGGT GATATAG
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Protein sequence | MPFLNITGAT KICGIIGDPI EHSFSPFMHN AAFAALGLDY AYVPFHVKRD NLSDALKAVR ALNIKGINVT VPHKQAVLQY LDEISSSASL IGAVNTVVNN HGYLVGYNTD APGFVRSLKE QAGFSPEGAG IFILGAGGAA RAVAVELALS GASLIHIANR TVDRAEEIAG LIEGNTSCSS KAYSQQDLSL SKLMKDADLI IQTTSQGMYP RVTELPAYPL DAFHAGQLVC DLIYNPRQTI FLQMAEQCGA KTLNGMGMLL YQGALAFEYW TGLASPVEIM DQALRQVI
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