| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_2745 |
|---|
| Symbol | |
|---|
| ID | 8429731 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | - |
|---|
| Start bp | 2901013 |
|---|
| End bp | 2901534 |
|---|
| Gene Length | 522 bp |
|---|
| Protein Length | 173 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 645035019 |
|---|
| Product | shikimate kinase |
|---|
| Protein accession | YP_003192146 |
|---|
| Protein GI | 258515924 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0703] Shikimate kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.164945 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.272805 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTTTAATA TTGTAATGAT AGGCTTTATG GGCACGGGTA AGACTGTTGT TGGCCGTCGT
TTGGCCGCGC TCTTAAAGAA GAGGTTTATA GATACTGATA CGGAAATAGA AAGAATTACT
GAAAAAACGA TTGTGCAAAT ATTTGCGCAG GACGGTGCTG TTCGTTTTCG TTCTGAAGAG
TCTTTGCTGG TTAAAAAATT GGAGGATCAG GATAATCTGG TTATATCTAC GGGCGGGGGT
ATAGTTTTAA ACCCGGAAAA CGTTGTATCG TTAAAGAAAA ACGGCATTTT AATTGCTTTG
AATGCACCTC CGGAGGTAAT ATATCAAAGA GTGAGACACA AGCGCAGCAG GCCGTTGCTG
AATAAAGGTG ATGCTTTAAT TAAAATTAAG GAACTGTTTG CTGAACGGGA ATATGCCTAT
GATGTGGCAG AATACAGGGT GGAGACCGGG GACAAGCAGG TGGATGAAGT GGTGCAGGAA
ATTATTCTAT ACTTAAAAAA TAAATACAAC ATGAGAATAT GA
|
|---|
| Protein sequence | MFNIVMIGFM GTGKTVVGRR LAALLKKRFI DTDTEIERIT EKTIVQIFAQ DGAVRFRSEE
SLLVKKLEDQ DNLVISTGGG IVLNPENVVS LKKNGILIAL NAPPEVIYQR VRHKRSRPLL
NKGDALIKIK ELFAEREYAY DVAEYRVETG DKQVDEVVQE IILYLKNKYN MRI
|
|---|
| |