Gene Dtox_2725 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_2725 
Symbol 
ID8429711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp2877809 
End bp2878915 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content30% 
IMG OID645034999 
Productdiguanylate cyclase 
Protein accessionYP_003192126 
Protein GI258515904 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.211672 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAGAC AATTATTTGT TAACTTTACA ATTATTATAT CAGCAATAAG CATAACTGCC 
CATATGTTTA GAGAAAAGGA ACTGGTTCAT TCATCTCCAA TTAGTAGCCG AATTATTTTT
GGAATATGTT CAGGAGTATT AGGAATTATA TTGATGATCT TTAGTATTCA AGTTTTACCT
AATATTATTG TTGATTTCCG AAATGTCGCT GCTATATGGT CAGCTATTTA TGGTGGGCCT
GTATCGGCTA TAATAACTTG TATGATAATA GGAAGCTTTA GAGTTCTATA CTTCGGTCTA
ACAGATTCCT CCATAGCAGC ATTAATTAAT ATTAGTTTTA TGGCAATTGG ATTCAGTTTT
ATATGTAGAC AGTCTTTCAG TATGCGGAAA AAGTATGCAA TATGTGTAAT CTATGCTATA
TTTATTAGCT CTATCGCATT TTATCTAGTA TTAACGAATA ATAACGTGTT AGTAAAGGTT
CTGCTTTATT TCTCTATTGG AACTATAATA GTAACTTATT TTATGTATTA TCTTACTGAG
TTTCATATAA AATTAAATTC CTTATACAGG AAATTTAGGT CTGAGGCAAA ACAAGACTTT
TTAACCGGTT TAAATAATGT ACGTGGTTTT GACGAGGAAA TTAACTTCTT AATGAATAAT
AGTAAACAAA CAAGTCATGT AGTATCTCTA TTGTTTATAG ATATTGATTT CTTTAAAAAA
ATAAATGATA CTTATGGTCA TATAGCAGGT GATGCTATTT TAATAGAACT AGCCGATCTA
CTGCCAAAAC TGTGTAGCTA CAAAGATACA GTTTCTCGAA ACGGTGGTGA AGAATTTTCT
ATAATTCTCC GTGATTGCCC TCTAAGTAAG GCTATCGAAG TTGCTGAACG TATAAGGAGT
ATCATAGAAA AGTATCCATT TAAGTTATTA AATAACAACA TTATTAATAT TACAGTTTCT
ATTGGTGTAG CTAATTATCC TGATACTATA GATGAAATAA ATAAACTCAT AGAAAAGGCC
GATACCTCAC TATACAAAGC TAAGAGGACA GGTAGAAATA AGGTTTCAAT AATTCAGGAT
GATGAAGGTT TATGCCCTAA TACTTAG
 
Protein sequence
MFRQLFVNFT IIISAISITA HMFREKELVH SSPISSRIIF GICSGVLGII LMIFSIQVLP 
NIIVDFRNVA AIWSAIYGGP VSAIITCMII GSFRVLYFGL TDSSIAALIN ISFMAIGFSF
ICRQSFSMRK KYAICVIYAI FISSIAFYLV LTNNNVLVKV LLYFSIGTII VTYFMYYLTE
FHIKLNSLYR KFRSEAKQDF LTGLNNVRGF DEEINFLMNN SKQTSHVVSL LFIDIDFFKK
INDTYGHIAG DAILIELADL LPKLCSYKDT VSRNGGEEFS IILRDCPLSK AIEVAERIRS
IIEKYPFKLL NNNIINITVS IGVANYPDTI DEINKLIEKA DTSLYKAKRT GRNKVSIIQD
DEGLCPNT