Gene Dtox_2701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_2701 
Symbol 
ID8429687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp2861703 
End bp2862701 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content37% 
IMG OID645034976 
ProductTfp pilus assembly protein ATPase PilM-like protein 
Protein accessionYP_003192103 
Protein GI258515881 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4972] Tfp pilus assembly protein, ATPase PilM 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.942967 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTTCTT GTGAGAGTGA TGAAAAAACT ATGAAAAAAA ATATTGCAAC ATCAAGAATT 
GTCGGTATTG ACTGGGGTGC GGAAAAAGTT AGGTCCGCAG TTTTAAATTA CAAGGGTAAA
ATATCGGTTC AGGGCTTATA CAGTATTAAC TTAGCCGAGC GGGATATAAA AAAATTTGGC
AGTCAGGATG ACAGTTGGAC GGTGGCTGCT TTGGCCCAGA TGGCTGATCG ACTGGATATC
ACGGATGAGT TAGTTGTTTT AGGTTTAGAG GTTCCTCAGA TATCCTGTCG CCATATAAAA
ATTCCTATTC TGCCGGAACG TGAATTAAAC GGAGCAATTA AATGGGAAGT TGACAAGTAC
TATCAGGAAA AGGCAGAATA TATTACTTAC ACCTATTTAG TACTTGGTCA AATACAGGAA
AAGAAAAACA AGTTCTATAA TGTACTTCTA ATTGTTATCA ATAACGAAAT AGTTGATAAG
TATCGTTCAA TTTTTCAAGC CGCTGGGCTG AACCTGGCAA AAATTGATTT GCCGTCTTTA
GCCTTATGGA ATTTGTATAA AGAAGATAAC GGCAAAAATA TCGCTCTTGT TTTTATGTCC
TCGAATGTTT TGCATATCTT GATCATGCAA TATAATCAAA TCTACTTTTC ACGCAGTTTG
CCGGTATTTG ATTCTCATAA CATTGTCGAA CAGTTGGAGT TAACATTTCA ATATCTTGAG
CATTTTTTAC CTGTACCGCC GGTACAGGCT GTTATTATCA GCGGTACCGG CAATTATTCT
GATTTAGCGG TTTTGATTAA AGAAAAAATA AACATCGAGG TCAAGTCAGC GGAAGCCGTG
TTATGTGAAG GAGAAATAGT CAATCACGGT TATGAATTAG CTATTGGTTT AGCTTTGAGA
AGTGTTCCGC CAAATCCGGC AATAAAAAGA TTATTTTGTT TGCTCAGCAA AAGGTTTCAA
AAACACACTT TCTGTGAGGA GAGAAAAAAG TATGTATGA
 
Protein sequence
MTSCESDEKT MKKNIATSRI VGIDWGAEKV RSAVLNYKGK ISVQGLYSIN LAERDIKKFG 
SQDDSWTVAA LAQMADRLDI TDELVVLGLE VPQISCRHIK IPILPERELN GAIKWEVDKY
YQEKAEYITY TYLVLGQIQE KKNKFYNVLL IVINNEIVDK YRSIFQAAGL NLAKIDLPSL
ALWNLYKEDN GKNIALVFMS SNVLHILIMQ YNQIYFSRSL PVFDSHNIVE QLELTFQYLE
HFLPVPPVQA VIISGTGNYS DLAVLIKEKI NIEVKSAEAV LCEGEIVNHG YELAIGLALR
SVPPNPAIKR LFCLLSKRFQ KHTFCEERKK YV