| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_2665 |
|---|
| Symbol | |
|---|
| ID | 8429651 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | - |
|---|
| Start bp | 2812047 |
|---|
| End bp | 2813684 |
|---|
| Gene Length | 1638 bp |
|---|
| Protein Length | 545 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 645034943 |
|---|
| Product | type II secretion system protein E |
|---|
| Protein accession | YP_003192070 |
|---|
| Protein GI | 258515848 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAAAAA AAAATTTAGG AGAATTTCTC GTCGACAGGG GTGTTCTGGG CCGGGAGGAA
CTGGCTGCCG CTTTGAGAGC CCAGCGCGGT TCAAAGAAAA AGCTGGAGGA GTTGCTTGTC
GACCAGGGAT ACCTGCAGGA AGCCCAGCTA ACCCCTTTGC TGGGTGAGTT TTTTGATATG
CCGGTCTTTC CGGCGGACGA GGTCCGGTTT GCTCCCGAGG TCCTGGCCAC GGTGCCCAGG
CCGGTGGCGC TGAAGCACAA TATTATTCCG GTGGCTCTAA AAGAAAACGA CCTGTTTATC
GCTTGCTCCG AGCCGGCCAA CAGCGTAATT CTGGAGAACT TGCGCCGGCT CACAGGCAAA
AGGCTGCATC TCGTCCTCAT GAGTTCCTCC GGGCTTGCCG GGGTTTTACG GCAGGCTTAT
TCCGAAGATA CCGGGGATGC GGTGACGGCG GATGAGGAAA CTGCCGTCAC GGGAACGGAC
GACGCCATCA AGCTTTTAGA AGGATTGATT ATTAAAGCGG TTGCCCAGCG TGCTTCCGAT
CTGCATTTGG AGCCGTTGAG CGACGGTTTG CGCGTCCGTA TGCGGGTTGA CGGGATGCTC
AAGACCGTGG ACCGGATGCC GGCCTCCGTG GCGCCGCTGA TTATTTCAAG GACCAAAGTA
CTGTGCAATA TGAACATCGC CGATAAGCGC AGTCCCCAGG ACGGAGGGTT TGTATTCAGT
CAAAACGGAA GCGGCGATTC TATAAATGTA AGGGTTTCCA CCCTGCCCTG CGCTAAAGGG
GAAAAGGCTG TTTTAAGGTT TTTGCCCTCC CAGGACCGTC TGCTGGGAAT CGAAGACCTG
GGGATGGAAG AAGACGCGCA GGAGTCCTTT CGCAGCCTGC TGGATCTGCC CCACGGGTTG
ATCCTGGTTA CCGGACCCAC GGGAAGCGGC AAAACCAACA CACTTTATGC CGCGCTTAAA
TACCTGCGCA GTGACGGCGT GAATGTTACC ACCATTGAAG ATCCCATTGA ACTTCAGATG
GAAGGCATTA CCCAAACCCA GGCGGATTAT TCGTCCAAAA AACTGACCTT CAGCAGCGCC
TTGCGGGCTA TTTTAAGGCA GGACCCCGAT ATCATCATGG TGGGCGAAAT CAGAGACGGG
GAGACCGCCG GTCTGGCCCT GCAGGCGGCC CTCACCGGCC ACCTGGTGCT CTCCACCCTG
CACACTAATG ATGCGGCAAG CGCGGTGGAG CGGCTTGTGG ACATGGGCTG TGAGCGTTAC
CTGGTGAATT CCTCCCTGCG GGCAGTGCTG GCTCAGCGCC TGGTGCGCGT CATTTGCCCC
AAATGCCGCC GGAAATATGC GGCAACCTCC GATGAATTGT CGGCCCTGGG GTTGGATCCC
GGGCACGGTG AGGAGTTCTA TAGCGGCCGG GGCTGCACTT ATTGCCAGGG AACCGGCTAC
CGGGGAAGAA TAGGGATTTT TGAACTGCTG TCGCTCGATC AAGAAATGCA AAAACTAATC
AGCGGCGGTG CCGATACGGT AGCCATCAAA GAACAGTCCA GGGACAAAAT GCGCACCCTG
CGTGAGGACG GCATCATCAA GCTGCGCAGG GGAGTGTCCA GTGTTCCTGA AATTTTAAAG
GCCGCCAGAG AATGGTAG
|
|---|
| Protein sequence | MTKKNLGEFL VDRGVLGREE LAAALRAQRG SKKKLEELLV DQGYLQEAQL TPLLGEFFDM
PVFPADEVRF APEVLATVPR PVALKHNIIP VALKENDLFI ACSEPANSVI LENLRRLTGK
RLHLVLMSSS GLAGVLRQAY SEDTGDAVTA DEETAVTGTD DAIKLLEGLI IKAVAQRASD
LHLEPLSDGL RVRMRVDGML KTVDRMPASV APLIISRTKV LCNMNIADKR SPQDGGFVFS
QNGSGDSINV RVSTLPCAKG EKAVLRFLPS QDRLLGIEDL GMEEDAQESF RSLLDLPHGL
ILVTGPTGSG KTNTLYAALK YLRSDGVNVT TIEDPIELQM EGITQTQADY SSKKLTFSSA
LRAILRQDPD IIMVGEIRDG ETAGLALQAA LTGHLVLSTL HTNDAASAVE RLVDMGCERY
LVNSSLRAVL AQRLVRVICP KCRRKYAATS DELSALGLDP GHGEEFYSGR GCTYCQGTGY
RGRIGIFELL SLDQEMQKLI SGGADTVAIK EQSRDKMRTL REDGIIKLRR GVSSVPEILK
AAREW
|
|---|
| |