Gene Dtox_2613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_2613 
Symbol 
ID8429599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp2762653 
End bp2767161 
Gene Length4509 bp 
Protein Length1502 aa 
Translation table11 
GC content52% 
IMG OID645034902 
ProductDEAD/DEAH box helicase domain protein 
Protein accessionYP_003192029 
Protein GI258515807 
COG category[R] General function prediction only 
COG ID[COG1201] Lhr-like helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.670287 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACACT CGGTTTTTTC TCTGTTTCAT CCACTTATCC GCAAATGGTT TGCCGAAAAG 
GTAGGCGAGC CTACCGATAT TCAGATCCAA GCCTGGCCTC GCATTACCAA AGGCGAGCAC
GTCCTGATCA CAGCTCCCAC GGGCAGCGGC AAAACCTTGA CCGCCTTTCT CTGGGCACTG
CAAAAGCTGA TTACCGGGGA TTGGCCGCTT GGCCGGGTAC GGGTTTTGTA TGTTTCGCCC
CTGAAGGCCC TCAACAACGA TGTGCAGCGC AACCTGTTGC AGCCCCTTCA GGAGCTGCGG
GCGTATTTTG CAGAAGCCGG TGAGCTGTTT CCCCCTATTC AAGTACTCAC CCGCAGCGGT
GATACCCCTC AAAACGAACG ACGGCAGATG CTGCGCAAAC CGCCTGAGAT CCTGATCACC
ACGCCTGAGA GTCTCAATCT GCTGCTTAGT TCCAAAAACA ACCGCCTGAT TTTAAGCGGA
GTGGAAACGG TTATTTTGGA TGAGATCCAC GCAGTTCTGG ATAACAAACG GGGCACCCAC
CTGATCACGG CAGTGGACCG GCTTGTTCTT TTGGCGGGGG AATTCCAAAG GATCGCCCTA
TCTGCCACGG TTCGCCCTCT GGAACCGGTC GCCGAATTTG TTGGCGGTTT TAAAGCATGT
CGGGACGGCG AGGATTGCCG GTATCAAAAG CGGCCGCTGG TTATCTTGAG ATCTGCGGCA
AAAAAACACT ATAATTTAAT CGTTGACGCT ATTGAACGGA ACAATGGCGG GGCGGAGGAG
GTAGAGCAGG ACGCCCTCTG GCAGGCTCTG GCTGCCGTCT TGACAAAGGT GATTAAAGAA
AACATCGCCA CACTGGTGTT TTGCAACAAC CGCCGGGCCG TAGAAAAACT GAGCCGATAT
ATCAATGATG CTGCTGGTGA GTCTCTGGTC TATTCCCACC ATGGTTCACT GGCCAAAGAG
CTCCGCCTAA CGGTGGAACA AAAACTCAAA AACGGTGAAC TGAAAGGGAT CGTAGCCACT
AATTCCCTCG AATTGGGAAT CGATATCGGT AAACTGGATA CGGTAATTTT GGTGCAAACC
CCGCCCTCGC TGACTGCCGC CATCCAAAGG ATCGGCCGGG CCGGACACAG TGTGGGCCAG
GTGAGCCGGG GAATTTTGTT TCCCATTTGC GGGCGCGATT TTGTGGAAGC CGCGGTGGTT
TCACGCAGCT TGCCCGCGGT CGAGATTGAG CTAATCACAC CTATTGAAGC ACCCCTGGAT
GTGCTGGCAC AAGTGCTTTT ATCCATGACC GCCGTTGAAA CCTGGGATGC GGATGAGCTT
TATGCTTTCC TCAAGACCAG TTATCCTTAT CGCAATCTGT CCCGGAAGAG TTATGACCTG
TTGCTGGAAA TGCTTGCGGG CCGTTATGCG GATACCCGCC TGCGCGAATT GAAACCGCGT
ATTATTTGGG ATAAGCTTGA CCGTACAATC AAAGCCCGTG ACGGGGTGGC CCGCCTGGTT
TACTTGGGAG GCGGCACCAT CCCGGACCGG GGTTACTATG ATCTCCGCCT GCTGGATACC
AAGGCTAAGA TCGGTGAGCT GGACGAGGAG TTTGTCTGGG AGCGGAGTGT GGGCGAAACC
TTCATGCTTG GTACACAGGT CTGGAAGATT ATGTGCATTA CTCATAATGA TGTGGAAGTG
ATTCCCGGTG CTCAGACAAT CAACATCATA CCCTTCTGGC GGGCGGAAGA GCAAAACCGG
GATTTCTTTT ATTCCGAAAA AATAGGCCTC TTTTTGGAAG AGGCGGAGCA AAACCTGAAA
ACAGACTCCT TCGCGCATCA GCTGGTGACC CCAAACACTT GGTCCGTGTA TGCGGTTGAA
CGGCTTATTG AATTTCTCAA ACGGCAAAAA GAAGCTGCGG GCCAACCCTT ACCCCATCGT
CATCATATTT TAATTGAACA CTTTGCCGAC CCCCTGAACA CGGCGGACAG CAAACAGGTT
ATTGTACATA CCCTCTGGGG CGGCAAAGTC AACCGGCCTT TTGCCATGGG TTTGGCTGCC
GCCTGGGAGC AAAAGTTCGG CTATCCCCTG GAGATTTATG TCAGCAACAA TAGCATCATG
TTAATGCTGC CCCACAGTTT TGCGCTGCAA GAGCTTTTCT CCCTGGTCTC ACCTCAAAAT
TTAGAGGATT TCTTGCGGGG CAAACTGGAG AGTTCGGGTT TCTTTGGAGC TAAATTTCGG
GAAAACGCAG GTACTGCCTT GCTGCTGCCC AGAGTCAATT TCAAAAAGCG CATGCCTTTA
TGGCTCAACC GCCTCAGAGC CAAAAAATTG CAGGCAGCAG TCTCCTCATA TGCCGATTTT
CCGATCATGA TTGAGACCTG GCGCACCTGC CTGAAGGACG AATTCGATTT AGACATGGTT
AAGCAACTGT TGGATGAAAT AAATGATGGC CGGATCAAAA TAAGTGAAAC GGTTACTCAT
CAACCGTCTC CCTTCGCGTC TGATGTGATC TGGCGCCAGA CCAATAAATA CATGTATGAA
GACGATACCC CTTTTTCTGA TCGGCAGTCG GGTTTAAGCG GGGAGCTGTT GAAAGAACTG
GTGTATTCAC CTCATTTACG GCCCGAAATC CCGGAGGCCC TAGTCCGGCA ATTGAACGGC
AAACTCAAGC GGACCGCCCC GGGGTATGCG CCCACTGACG GAGAGGAATT ATTGCTCTGG
ATCAAAGAAC GCCTTTTTAT TCCCGCCGAT GAAGCGGCAT CCCTCTTTGC CGCCATGGAA
CGGGATCTCC AGTCAGCCGA TCACAAGTTA ACCTTAGAAA AGATCAAGCG CACTCTGGGG
GACAAATTGG CCTGGCTTCA TCTGCCGGGG GCGGAACAGC CGGGCTTGTG TGCCCTGGAG
ATCCTGCCCA GGATAGTTGC CTGCCTGGGT GCCGTCTTTT CCGACCTTGT CCTGCACCCC
TTAATCCCTC AGGCAGTTAG TCAGATGTCG GCGGGCTTGA GCAAGGTTGC TGCCCTATTT
GAACAGGAGA CGGCTGCGGA ACCCGGGGAA TTTGGCGGCG ATGTTACAGA CACCGCCCTC
TTCGTAAGCC AGTGGTTATC CTACTACGGT CCCGTGCCCC GGGATTTTGT CAGCCGGTGC
CTTGGCCTGC CGGTTAATGT TTCTGCGGCG GTGTTGGCCA TCCTGTTGAA AGAGGAATGT
ATTGTGGCGG ATGTGTTTAC GCAGGAAGCC GGCGAAGCAG AGGTATGTGA GCGGGAAAAT
TTGGAGCGCT TGTTTGCGAT GGCCAGGCGT GCACGCCGGC AGGAGGACAA GCCCTTGCCG
GTAACGGCAT TGCCCTTGTT TTTGGCGACC TACCAGGGGG TTGTGGAAAA AGGAACGAAC
ATGGAAGATT TACAAGCACG CCTGGAACAA TTGTTTGGCT TGATTAGCCA GGCCCAGCTT
TGGGAGGAAG CAATCCTGCC AGCCCGTCTG GAGACCTATT ATACCTCTTG GATGGATAGC
CTCATGCAAA CCAGTGATCT GGTTTGGTTC GGCCGCGGCA ATAAGCGGGT GGTTTTTTGC
TTGCGTGAAG ATTTGGAGTT GTTCCCTCCC GCTGAAGAGG GGCAGGGACC AGAAGATAAA
GTACAGGCGC GGGATCTTTT TCCGGATCCA TTGGGCAAAT ACGATTTCTT TACCCTCAGC
CGGCATACGG GTTTACCGAG TGATGATCTG ACTCAACGGT TGTGGCGTCA TGTTTGGCAA
GGCAATATTG CCAACGATAG TTTTGCCGTG TTACGCAGGG GCCTCCTAAC CAAATTTACA
CCCCTCCAGG TGGAAGGCAA GCATGGTTTT GGCCGCCGTT CCGGATACAG CCGCTGGTCT
GCTTCGCGTC CTTTACAGGG CAACTGGTAT GCCTTGTCGG AATGTGAAGA GAAGGATCCT
ATTGAGCGGG AGGAACTGGT CAAAGAAAGG ATCCGCCAGC TTTTTTCCCG TTATGGCGTG
CTTTTTCGCG AACTGATCCA GCAGGAATTG CCCGAGATGC AGTGGCGGCG GATTTTTCGT
ACGCTGCGTC TCATGGAGTT TTCCGGGGAG ATTTATGCCG GGCATTTTTT TGCACAAATC
ATTGGTTTAC AGTTTGCCTC CCGGGAAGCA AACCGACTAT TGCACAAAGG ATTAAACGAG
AAAAGTATTT ACTGGCTGAA TGCTGCCGAT CCGGCATCGC CCTGCGGTCT TAAACTTCCC
GGTTTGGACG AAGACCTTCC CACCCGTTTA GCAACCAATT TTGTCGTATT TCACGGCACC
CGGTTAAAAT TGGTGGCCAA ACGTAACGGC AAAGAGCTTT TGATCAAAGC CGGACCCGAT
GATGCGTCTT TACCCGAGTA TTTTGCCTTT TGCAAGACTC TCTTAACGCG TGAGTTTAAT
CCATTAAAAA GTATAGTCGT GGAATCCATT AACGGCCGAC CGGCTTTGGA AAGCCCCTAT
AAAAAAGCTT TACAGGGGAT TGGCTTTATC GGTGAGTATA AAGGTCTGAT ATTGAGACGA
CAATATTAA
 
Protein sequence
MKHSVFSLFH PLIRKWFAEK VGEPTDIQIQ AWPRITKGEH VLITAPTGSG KTLTAFLWAL 
QKLITGDWPL GRVRVLYVSP LKALNNDVQR NLLQPLQELR AYFAEAGELF PPIQVLTRSG
DTPQNERRQM LRKPPEILIT TPESLNLLLS SKNNRLILSG VETVILDEIH AVLDNKRGTH
LITAVDRLVL LAGEFQRIAL SATVRPLEPV AEFVGGFKAC RDGEDCRYQK RPLVILRSAA
KKHYNLIVDA IERNNGGAEE VEQDALWQAL AAVLTKVIKE NIATLVFCNN RRAVEKLSRY
INDAAGESLV YSHHGSLAKE LRLTVEQKLK NGELKGIVAT NSLELGIDIG KLDTVILVQT
PPSLTAAIQR IGRAGHSVGQ VSRGILFPIC GRDFVEAAVV SRSLPAVEIE LITPIEAPLD
VLAQVLLSMT AVETWDADEL YAFLKTSYPY RNLSRKSYDL LLEMLAGRYA DTRLRELKPR
IIWDKLDRTI KARDGVARLV YLGGGTIPDR GYYDLRLLDT KAKIGELDEE FVWERSVGET
FMLGTQVWKI MCITHNDVEV IPGAQTINII PFWRAEEQNR DFFYSEKIGL FLEEAEQNLK
TDSFAHQLVT PNTWSVYAVE RLIEFLKRQK EAAGQPLPHR HHILIEHFAD PLNTADSKQV
IVHTLWGGKV NRPFAMGLAA AWEQKFGYPL EIYVSNNSIM LMLPHSFALQ ELFSLVSPQN
LEDFLRGKLE SSGFFGAKFR ENAGTALLLP RVNFKKRMPL WLNRLRAKKL QAAVSSYADF
PIMIETWRTC LKDEFDLDMV KQLLDEINDG RIKISETVTH QPSPFASDVI WRQTNKYMYE
DDTPFSDRQS GLSGELLKEL VYSPHLRPEI PEALVRQLNG KLKRTAPGYA PTDGEELLLW
IKERLFIPAD EAASLFAAME RDLQSADHKL TLEKIKRTLG DKLAWLHLPG AEQPGLCALE
ILPRIVACLG AVFSDLVLHP LIPQAVSQMS AGLSKVAALF EQETAAEPGE FGGDVTDTAL
FVSQWLSYYG PVPRDFVSRC LGLPVNVSAA VLAILLKEEC IVADVFTQEA GEAEVCEREN
LERLFAMARR ARRQEDKPLP VTALPLFLAT YQGVVEKGTN MEDLQARLEQ LFGLISQAQL
WEEAILPARL ETYYTSWMDS LMQTSDLVWF GRGNKRVVFC LREDLELFPP AEEGQGPEDK
VQARDLFPDP LGKYDFFTLS RHTGLPSDDL TQRLWRHVWQ GNIANDSFAV LRRGLLTKFT
PLQVEGKHGF GRRSGYSRWS ASRPLQGNWY ALSECEEKDP IEREELVKER IRQLFSRYGV
LFRELIQQEL PEMQWRRIFR TLRLMEFSGE IYAGHFFAQI IGLQFASREA NRLLHKGLNE
KSIYWLNAAD PASPCGLKLP GLDEDLPTRL ATNFVVFHGT RLKLVAKRNG KELLIKAGPD
DASLPEYFAF CKTLLTREFN PLKSIVVESI NGRPALESPY KKALQGIGFI GEYKGLILRR
QY