Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtox_2613 |
Symbol | |
ID | 8429599 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum acetoxidans DSM 771 |
Kingdom | Bacteria |
Replicon accession | NC_013216 |
Strand | - |
Start bp | 2762653 |
End bp | 2767161 |
Gene Length | 4509 bp |
Protein Length | 1502 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 645034902 |
Product | DEAD/DEAH box helicase domain protein |
Protein accession | YP_003192029 |
Protein GI | 258515807 |
COG category | [R] General function prediction only |
COG ID | [COG1201] Lhr-like helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.670287 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACACT CGGTTTTTTC TCTGTTTCAT CCACTTATCC GCAAATGGTT TGCCGAAAAG GTAGGCGAGC CTACCGATAT TCAGATCCAA GCCTGGCCTC GCATTACCAA AGGCGAGCAC GTCCTGATCA CAGCTCCCAC GGGCAGCGGC AAAACCTTGA CCGCCTTTCT CTGGGCACTG CAAAAGCTGA TTACCGGGGA TTGGCCGCTT GGCCGGGTAC GGGTTTTGTA TGTTTCGCCC CTGAAGGCCC TCAACAACGA TGTGCAGCGC AACCTGTTGC AGCCCCTTCA GGAGCTGCGG GCGTATTTTG CAGAAGCCGG TGAGCTGTTT CCCCCTATTC AAGTACTCAC CCGCAGCGGT GATACCCCTC AAAACGAACG ACGGCAGATG CTGCGCAAAC CGCCTGAGAT CCTGATCACC ACGCCTGAGA GTCTCAATCT GCTGCTTAGT TCCAAAAACA ACCGCCTGAT TTTAAGCGGA GTGGAAACGG TTATTTTGGA TGAGATCCAC GCAGTTCTGG ATAACAAACG GGGCACCCAC CTGATCACGG CAGTGGACCG GCTTGTTCTT TTGGCGGGGG AATTCCAAAG GATCGCCCTA TCTGCCACGG TTCGCCCTCT GGAACCGGTC GCCGAATTTG TTGGCGGTTT TAAAGCATGT CGGGACGGCG AGGATTGCCG GTATCAAAAG CGGCCGCTGG TTATCTTGAG ATCTGCGGCA AAAAAACACT ATAATTTAAT CGTTGACGCT ATTGAACGGA ACAATGGCGG GGCGGAGGAG GTAGAGCAGG ACGCCCTCTG GCAGGCTCTG GCTGCCGTCT TGACAAAGGT GATTAAAGAA AACATCGCCA CACTGGTGTT TTGCAACAAC CGCCGGGCCG TAGAAAAACT GAGCCGATAT ATCAATGATG CTGCTGGTGA GTCTCTGGTC TATTCCCACC ATGGTTCACT GGCCAAAGAG CTCCGCCTAA CGGTGGAACA AAAACTCAAA AACGGTGAAC TGAAAGGGAT CGTAGCCACT AATTCCCTCG AATTGGGAAT CGATATCGGT AAACTGGATA CGGTAATTTT GGTGCAAACC CCGCCCTCGC TGACTGCCGC CATCCAAAGG ATCGGCCGGG CCGGACACAG TGTGGGCCAG GTGAGCCGGG GAATTTTGTT TCCCATTTGC GGGCGCGATT TTGTGGAAGC CGCGGTGGTT TCACGCAGCT TGCCCGCGGT CGAGATTGAG CTAATCACAC CTATTGAAGC ACCCCTGGAT GTGCTGGCAC AAGTGCTTTT ATCCATGACC GCCGTTGAAA CCTGGGATGC GGATGAGCTT TATGCTTTCC TCAAGACCAG TTATCCTTAT CGCAATCTGT CCCGGAAGAG TTATGACCTG TTGCTGGAAA TGCTTGCGGG CCGTTATGCG GATACCCGCC TGCGCGAATT GAAACCGCGT ATTATTTGGG ATAAGCTTGA CCGTACAATC AAAGCCCGTG ACGGGGTGGC CCGCCTGGTT TACTTGGGAG GCGGCACCAT CCCGGACCGG GGTTACTATG ATCTCCGCCT GCTGGATACC AAGGCTAAGA TCGGTGAGCT GGACGAGGAG TTTGTCTGGG AGCGGAGTGT GGGCGAAACC TTCATGCTTG GTACACAGGT CTGGAAGATT ATGTGCATTA CTCATAATGA TGTGGAAGTG ATTCCCGGTG CTCAGACAAT CAACATCATA CCCTTCTGGC GGGCGGAAGA GCAAAACCGG GATTTCTTTT ATTCCGAAAA AATAGGCCTC TTTTTGGAAG AGGCGGAGCA AAACCTGAAA ACAGACTCCT TCGCGCATCA GCTGGTGACC CCAAACACTT GGTCCGTGTA TGCGGTTGAA CGGCTTATTG AATTTCTCAA ACGGCAAAAA GAAGCTGCGG GCCAACCCTT ACCCCATCGT CATCATATTT TAATTGAACA CTTTGCCGAC CCCCTGAACA CGGCGGACAG CAAACAGGTT ATTGTACATA CCCTCTGGGG CGGCAAAGTC AACCGGCCTT TTGCCATGGG TTTGGCTGCC GCCTGGGAGC AAAAGTTCGG CTATCCCCTG GAGATTTATG TCAGCAACAA TAGCATCATG TTAATGCTGC CCCACAGTTT TGCGCTGCAA GAGCTTTTCT CCCTGGTCTC ACCTCAAAAT TTAGAGGATT TCTTGCGGGG CAAACTGGAG AGTTCGGGTT TCTTTGGAGC TAAATTTCGG GAAAACGCAG GTACTGCCTT GCTGCTGCCC AGAGTCAATT TCAAAAAGCG CATGCCTTTA TGGCTCAACC GCCTCAGAGC CAAAAAATTG CAGGCAGCAG TCTCCTCATA TGCCGATTTT CCGATCATGA TTGAGACCTG GCGCACCTGC CTGAAGGACG AATTCGATTT AGACATGGTT AAGCAACTGT TGGATGAAAT AAATGATGGC CGGATCAAAA TAAGTGAAAC GGTTACTCAT CAACCGTCTC CCTTCGCGTC TGATGTGATC TGGCGCCAGA CCAATAAATA CATGTATGAA GACGATACCC CTTTTTCTGA TCGGCAGTCG GGTTTAAGCG GGGAGCTGTT GAAAGAACTG GTGTATTCAC CTCATTTACG GCCCGAAATC CCGGAGGCCC TAGTCCGGCA ATTGAACGGC AAACTCAAGC GGACCGCCCC GGGGTATGCG CCCACTGACG GAGAGGAATT ATTGCTCTGG ATCAAAGAAC GCCTTTTTAT TCCCGCCGAT GAAGCGGCAT CCCTCTTTGC CGCCATGGAA CGGGATCTCC AGTCAGCCGA TCACAAGTTA ACCTTAGAAA AGATCAAGCG CACTCTGGGG GACAAATTGG CCTGGCTTCA TCTGCCGGGG GCGGAACAGC CGGGCTTGTG TGCCCTGGAG ATCCTGCCCA GGATAGTTGC CTGCCTGGGT GCCGTCTTTT CCGACCTTGT CCTGCACCCC TTAATCCCTC AGGCAGTTAG TCAGATGTCG GCGGGCTTGA GCAAGGTTGC TGCCCTATTT GAACAGGAGA CGGCTGCGGA ACCCGGGGAA TTTGGCGGCG ATGTTACAGA CACCGCCCTC TTCGTAAGCC AGTGGTTATC CTACTACGGT CCCGTGCCCC GGGATTTTGT CAGCCGGTGC CTTGGCCTGC CGGTTAATGT TTCTGCGGCG GTGTTGGCCA TCCTGTTGAA AGAGGAATGT ATTGTGGCGG ATGTGTTTAC GCAGGAAGCC GGCGAAGCAG AGGTATGTGA GCGGGAAAAT TTGGAGCGCT TGTTTGCGAT GGCCAGGCGT GCACGCCGGC AGGAGGACAA GCCCTTGCCG GTAACGGCAT TGCCCTTGTT TTTGGCGACC TACCAGGGGG TTGTGGAAAA AGGAACGAAC ATGGAAGATT TACAAGCACG CCTGGAACAA TTGTTTGGCT TGATTAGCCA GGCCCAGCTT TGGGAGGAAG CAATCCTGCC AGCCCGTCTG GAGACCTATT ATACCTCTTG GATGGATAGC CTCATGCAAA CCAGTGATCT GGTTTGGTTC GGCCGCGGCA ATAAGCGGGT GGTTTTTTGC TTGCGTGAAG ATTTGGAGTT GTTCCCTCCC GCTGAAGAGG GGCAGGGACC AGAAGATAAA GTACAGGCGC GGGATCTTTT TCCGGATCCA TTGGGCAAAT ACGATTTCTT TACCCTCAGC CGGCATACGG GTTTACCGAG TGATGATCTG ACTCAACGGT TGTGGCGTCA TGTTTGGCAA GGCAATATTG CCAACGATAG TTTTGCCGTG TTACGCAGGG GCCTCCTAAC CAAATTTACA CCCCTCCAGG TGGAAGGCAA GCATGGTTTT GGCCGCCGTT CCGGATACAG CCGCTGGTCT GCTTCGCGTC CTTTACAGGG CAACTGGTAT GCCTTGTCGG AATGTGAAGA GAAGGATCCT ATTGAGCGGG AGGAACTGGT CAAAGAAAGG ATCCGCCAGC TTTTTTCCCG TTATGGCGTG CTTTTTCGCG AACTGATCCA GCAGGAATTG CCCGAGATGC AGTGGCGGCG GATTTTTCGT ACGCTGCGTC TCATGGAGTT TTCCGGGGAG ATTTATGCCG GGCATTTTTT TGCACAAATC ATTGGTTTAC AGTTTGCCTC CCGGGAAGCA AACCGACTAT TGCACAAAGG ATTAAACGAG AAAAGTATTT ACTGGCTGAA TGCTGCCGAT CCGGCATCGC CCTGCGGTCT TAAACTTCCC GGTTTGGACG AAGACCTTCC CACCCGTTTA GCAACCAATT TTGTCGTATT TCACGGCACC CGGTTAAAAT TGGTGGCCAA ACGTAACGGC AAAGAGCTTT TGATCAAAGC CGGACCCGAT GATGCGTCTT TACCCGAGTA TTTTGCCTTT TGCAAGACTC TCTTAACGCG TGAGTTTAAT CCATTAAAAA GTATAGTCGT GGAATCCATT AACGGCCGAC CGGCTTTGGA AAGCCCCTAT AAAAAAGCTT TACAGGGGAT TGGCTTTATC GGTGAGTATA AAGGTCTGAT ATTGAGACGA CAATATTAA
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Protein sequence | MKHSVFSLFH PLIRKWFAEK VGEPTDIQIQ AWPRITKGEH VLITAPTGSG KTLTAFLWAL QKLITGDWPL GRVRVLYVSP LKALNNDVQR NLLQPLQELR AYFAEAGELF PPIQVLTRSG DTPQNERRQM LRKPPEILIT TPESLNLLLS SKNNRLILSG VETVILDEIH AVLDNKRGTH LITAVDRLVL LAGEFQRIAL SATVRPLEPV AEFVGGFKAC RDGEDCRYQK RPLVILRSAA KKHYNLIVDA IERNNGGAEE VEQDALWQAL AAVLTKVIKE NIATLVFCNN RRAVEKLSRY INDAAGESLV YSHHGSLAKE LRLTVEQKLK NGELKGIVAT NSLELGIDIG KLDTVILVQT PPSLTAAIQR IGRAGHSVGQ VSRGILFPIC GRDFVEAAVV SRSLPAVEIE LITPIEAPLD VLAQVLLSMT AVETWDADEL YAFLKTSYPY RNLSRKSYDL LLEMLAGRYA DTRLRELKPR IIWDKLDRTI KARDGVARLV YLGGGTIPDR GYYDLRLLDT KAKIGELDEE FVWERSVGET FMLGTQVWKI MCITHNDVEV IPGAQTINII PFWRAEEQNR DFFYSEKIGL FLEEAEQNLK TDSFAHQLVT PNTWSVYAVE RLIEFLKRQK EAAGQPLPHR HHILIEHFAD PLNTADSKQV IVHTLWGGKV NRPFAMGLAA AWEQKFGYPL EIYVSNNSIM LMLPHSFALQ ELFSLVSPQN LEDFLRGKLE SSGFFGAKFR ENAGTALLLP RVNFKKRMPL WLNRLRAKKL QAAVSSYADF PIMIETWRTC LKDEFDLDMV KQLLDEINDG RIKISETVTH QPSPFASDVI WRQTNKYMYE DDTPFSDRQS GLSGELLKEL VYSPHLRPEI PEALVRQLNG KLKRTAPGYA PTDGEELLLW IKERLFIPAD EAASLFAAME RDLQSADHKL TLEKIKRTLG DKLAWLHLPG AEQPGLCALE ILPRIVACLG AVFSDLVLHP LIPQAVSQMS AGLSKVAALF EQETAAEPGE FGGDVTDTAL FVSQWLSYYG PVPRDFVSRC LGLPVNVSAA VLAILLKEEC IVADVFTQEA GEAEVCEREN LERLFAMARR ARRQEDKPLP VTALPLFLAT YQGVVEKGTN MEDLQARLEQ LFGLISQAQL WEEAILPARL ETYYTSWMDS LMQTSDLVWF GRGNKRVVFC LREDLELFPP AEEGQGPEDK VQARDLFPDP LGKYDFFTLS RHTGLPSDDL TQRLWRHVWQ GNIANDSFAV LRRGLLTKFT PLQVEGKHGF GRRSGYSRWS ASRPLQGNWY ALSECEEKDP IEREELVKER IRQLFSRYGV LFRELIQQEL PEMQWRRIFR TLRLMEFSGE IYAGHFFAQI IGLQFASREA NRLLHKGLNE KSIYWLNAAD PASPCGLKLP GLDEDLPTRL ATNFVVFHGT RLKLVAKRNG KELLIKAGPD DASLPEYFAF CKTLLTREFN PLKSIVVESI NGRPALESPY KKALQGIGFI GEYKGLILRR QY
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