| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_2579 |
|---|
| Symbol | |
|---|
| ID | 8429565 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | - |
|---|
| Start bp | 2732329 |
|---|
| End bp | 2734017 |
|---|
| Gene Length | 1689 bp |
|---|
| Protein Length | 562 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 645034868 |
|---|
| Product | DNA repair protein RecN |
|---|
| Protein accession | YP_003191995 |
|---|
| Protein GI | 258515773 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0497] ATPase involved in DNA repair |
|---|
| TIGRFAM ID | [TIGR00634] DNA repair protein RecN |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.183283 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTAATTA CCTTAACCGT ACAAAATTTT GGGATTATAG AAAATCTGTT GATGGAATTC
GACCGAGGGC TGAATGTATT GACAGGGGAA ACAGGAGCCG GTAAATCAAT TGTCCTGGAT
GCCTTATCAG CGGCGCTGGG AGGTAGATGT TCTCCGGAAG CCATTCGTTA CGAGCAAAAA
AAGGCCCTGG TGGAAACTCA ATTTTACATT GATAATATAC CCAGAATAAA TAACTTGTTG
ATTGAAGCAG GGTTAGAACC GGAAGAAGAC GGTACATTAA TTATGACCCG TGAAATTAAC
CGGAGCGGCA AGAACCTCTG CCGTATTAAC GGGCGTAGCG TTGTTCTTTC TATTTACAGG
GAAATAGGCA AATACCTGAT TGATATGCAT GGGCAGCACC AACAGCAGTC CTTATTGGAT
ATAGACAAGC AGAGGGAACT GCTGGATGCT TTTGGCGGGA AAGAGCACCT GGACCTGCTG
ACTGCAACCG GGGAAGCTTA TCGCAGTTGG CAGATGGTTT ACAAAGAATG CAAAGAATTA
ACCTTTGATG AACAAGAAAA ACAAAAAAAA ACAGATATGC TGCTGTATCA AATAGAGGAA
ATAAATAAAG CTCAGTTAAA GCCGGGGGAA GATGTGGAAC TGGCAGCAGA GTTTAATATC
CTTTTGAATG CTGAAAAAAT TATCAGGTTA ATAAACGAAA GTTACAATTA TTTATATGAG
GGAAGTTCCG GCACGAGAGC TGTAACCGAA CAACTCAGCA AAACAGTTAG TAATTTGGAA
ACCTTACAGG AATATGGAGC AGCTTTTATA GACATGAAAA CTGCTATGGA AAGTATGCTC
TATCAAATTG AAGATATGGC CCGTGATTTA GCAAATTATA GGCATAATAT AGAGTTTAAT
CCCCAGCGCT TGCAAGCCGT TGAGGAAAGG CTGGATTTAA TTAACAGATT AAAATATAAA
TATGGTGATT CAGTTGATGA AATATTGAAG TTCCAGGAAA AAGCCGAACA AGAATTAGAT
ACTATTGCAC ATAGCCATGA AAAAATAGAC GAGCTTATTA AGTTAAATTC AGAATCAGAA
CGCGAATATC TTACTCTTGC TGTTCAGTTG TCTGAATCAC GTCAAAAGAT AGCTCGCAAG
TTTCAAACTG CTGTTTCCCA AGAACTGCAT GCTTTAGAGA TGCCGGCGGC CATAATAGAG
GTTGAAATAA CCCGTGTCTC GCAGGGTTTC AACGGCCATG ACAAAATTGA ATTTTTGTTT
ACAGCTAATC CAGGTGAACC GCTGCGTCAG CTGGCAAAAA TAGCTTCAGG TGGCGAGCTT
TCGCGGGTTA TGCTGGCCTT AAAATCAATT TTTGCCGAGA TGGATGAAAT TCCGACTATG
ATTTTTGATG AAGTAGACAG CGGTATAGGG GGACGAGCAT TGCAAGCGGT AGCTGAAAAA
TTGGACTATC TCAGCCAACA GAGGCAGGTT ATATGCGTTT CACATGCTGT TCCAATAGCC
TGTTTGGCTG CCAAACATTT TCAAGTGGTT AAACAATTTA CGCATAATAT GACTGTAACG
GATATCCGGG AACTAAATAT GACAGAAAGA GTCGAGGAAC TAAGCCGCAT GTTGGGTGGT
AAAAATGTAA CGTCTATAAC CAGAGACCAT GCCAAACAAT TGTTAAACAG GTCATTAAAT
AAAAAATAA
|
|---|
| Protein sequence | MLITLTVQNF GIIENLLMEF DRGLNVLTGE TGAGKSIVLD ALSAALGGRC SPEAIRYEQK
KALVETQFYI DNIPRINNLL IEAGLEPEED GTLIMTREIN RSGKNLCRIN GRSVVLSIYR
EIGKYLIDMH GQHQQQSLLD IDKQRELLDA FGGKEHLDLL TATGEAYRSW QMVYKECKEL
TFDEQEKQKK TDMLLYQIEE INKAQLKPGE DVELAAEFNI LLNAEKIIRL INESYNYLYE
GSSGTRAVTE QLSKTVSNLE TLQEYGAAFI DMKTAMESML YQIEDMARDL ANYRHNIEFN
PQRLQAVEER LDLINRLKYK YGDSVDEILK FQEKAEQELD TIAHSHEKID ELIKLNSESE
REYLTLAVQL SESRQKIARK FQTAVSQELH ALEMPAAIIE VEITRVSQGF NGHDKIEFLF
TANPGEPLRQ LAKIASGGEL SRVMLALKSI FAEMDEIPTM IFDEVDSGIG GRALQAVAEK
LDYLSQQRQV ICVSHAVPIA CLAAKHFQVV KQFTHNMTVT DIRELNMTER VEELSRMLGG
KNVTSITRDH AKQLLNRSLN KK
|
|---|
| |