Gene Dtox_2415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_2415 
Symbol 
ID8429400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp2592681 
End bp2595347 
Gene Length2667 bp 
Protein Length888 aa 
Translation table11 
GC content40% 
IMG OID645034721 
ProductDNA polymerase I 
Protein accessionYP_003191849 
Protein GI258515627 
COG category[L] Replication, recombination and repair 
COG ID[COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains 
TIGRFAM ID[TIGR00593] DNA polymerase I 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0701371 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCACTGA AATCTTTAAC GGAAGCTAAA AACAATACCA TTTTAGTAAT TGATGGAAAC 
AGCCTTATCC ACCGGGCCTT CCACGCCATC CCGCTTTTAT CAACAGCAGA TGGTTTGCCT
ACCAATGCTG TTTACGGTTT CACCAACATG CTTTTAAAAA TTCTCAATGA TATACAGCCC
AAGTGGGTAA CAGTTGCCTT TGATAAGAGC AAAACAACTT TTCGCAACCA GGAATACAGT
GAATATAAAG CGCACCGCAA GGCCACTCCA GAGGAACTTA GGCCACAGTT CTCTCTGGTT
AAAGATGTCT TAAATGCGTT GTCCATTAAA TGGTTAGAAG CCGAAGGTTA TGAGGCGGAT
GATTTAATAG GGACGATCGT AAAAAAAGCT GAAGAGGAAG ATGCGGATGT AGTCATACTT
AGCGGTGACA AGGATATATT GCAACTTGTC TCTGATAAAA CAAGAGCCAT CTTAACGAAA
AAAGGTATCA CTGAAATTGA AGAATATAAT GCAGAAAATG TATATAGGAA ATTCGGTGTT
CACCCAAATC AAATTACTGA TTATAAGGGA CTAACCGGGG ATCCGTCTGA CAATATACCC
GGAGTTCCTG GCATCGGCCC TAAAACAGCA ACTAAACTGC TGCAAGATTT TGATTCAGTA
GAAAATATTT TAGCAAATTT AGATAAGATT ACTTCAAGAG CACGAACTTT AATGGAAAAC
AACAGTGAAC AGGCCTTGTT ATCAAAAAGG CTGGCTACAA TTATAACAAA TGTCCCCGTG
CAAATAACCC TGGAACAATG TATCAGAACA GAACCTAATG AAGCTGAATT ATTTAATATA
CTAAAAAAAT TAGAATTCAA GAAACTGCTG CGAGATATGT TGACCGCAGA AACCGGCAAT
TCCAATCAGA TTAAACAAAA GCATCTAATA AACAAACAGA GCTACGCGGT AGAATATATA
ACCTTATCAG AACAGGAGGA CTTTGAAGAT CTTCTTGTTC AGGCTCAAAA AAGCGGTAAG
GTTGCTCTGG CTCTGCAAGG AAGGAGAGAA AAAGGCTTAA TATCAGTAGC TCTGTGCTTA
TCAGAGGGAC AGAACTACTT ATTGCCATTA AATTCAAGTA CTGAAACCAC GTCATTTGCA
CTAAAATTAT TGCAAAATAT ATGTGTAGAC AGTAAAATAA AAAAATGTTG TTATGACACT
AAAGCTGATT TATGGCTGTT GCACTATTAC GGTATAGAGA TAAACCAACC AGGTTTTGAT
GTTATGCTTG CGGATTACCT GCTTAATCCC GGCAAATCTG CCCGCAGTCT GCCTGAAACA
GCACTATCGC ACTTGGATAT TGTTCTGCAA GAGGGCAGCG AAACATATTT GCCGGCCAGT
GCGGAAGTCA TTTCTCGCTT GGTCGATATT TTACAAAGCA AGCTGCTGCT GCAGGAACAG
GAAAATCTAT ATTATGATAT TGAACTGCCG CTGCTGAAAG TACTGGCCAG CATGGAAAGA
ACAGGCGTTA GTGTAGACAA AGAACAACTG CAGCTGATGT CTGAAGAACT AAATAAAAAA
CTTCAGGTAT TAACCACGGA TATTTACGAA CATGCAGGCG AAATTTTTAA CATTAATTCT
ACTAAGCAAT TGGGAAGCAT ACTCTTTGAA AAACTTAAAC TCAAGGCAGG CAAAAAAACC
AAAACCGGTT ATTCTACTGA TGTTACAGTG CTGGAAGAAC TCGCCGGTGA TCACCCGGTT
GTGTCATTAC TCTTGGAATA CAGGCAGTTG GCAAAATTGA AGTCCACTTA TGTCGACGGT
TTAACCGGCT TAATCAACCC TCAAACAGGG AAGCTGCATA CTACTTTTCA CCAGGCAGTT
ACGGCTACGG GAAGGTTATC CAGTTCGGAA CCAAATCTAC AAAATGTACC AATTAGATTA
GATGCAGGCA GAAAAATACG AAAATTTTTC GTGCCCTGCA AGCCTGATAA TTTTATTTTT
TCAGCCGACT ATTCGCAGAT AGAACTGCGA ATTCTTGCCC ATATTGCCCA GGATAATAAC
TTAATGGACG CTTTTGCTAA AAAACAAGAT ATTCATACCA GAACTGCATC AGAAGTTTTC
GGAGTTGCCA TGGATGAAGT TACACCTGAA ATGAGGGGAC GGGCCAAGGC TGTGAACTTT
GGTATTGTTT ACGGTATCAG TGACTTTGGC CTAGCTAAGG ACATAAAGGT AACCCGCAAA
GAAGCAGGAA GATATATTAA TAACTACTTT AACCGTTATT CCGGAGTTAA AGCCTATATT
GACCGGGTGA TTCGGGAAGC CAGAGAAAAA GGTTATGTCA CTACGATTTT GAACAGGCGA
CGCTACCTGC CGGATTTATT TAGTTCCAAC CGTGTTGTTC GTTCCTTCGG AGAAAGAACA
GCCATGAACA CACCCATTCA GGGAAGCGCG TCTGATATTA TAAAACTGGC GATGGTTTTA
ATTTACCGGG AAATGCGTAA AAGAAAGCTT TCCTCCACCA TGATTTTACA GGTTCACGAT
GAATTAATTT TTGATGTAGT TGCCAGTGAA GTTGAAGAGA TGCAGAACCT GGTTAAATAT
TATATGGAAA ATGCAGTAGA ATTAAGTGTT CCATTGGTGG TAGATATGAA AATAGGACCC
AACTGGTATG ACGTGCAAAA GATTTAG
 
Protein sequence
MSLKSLTEAK NNTILVIDGN SLIHRAFHAI PLLSTADGLP TNAVYGFTNM LLKILNDIQP 
KWVTVAFDKS KTTFRNQEYS EYKAHRKATP EELRPQFSLV KDVLNALSIK WLEAEGYEAD
DLIGTIVKKA EEEDADVVIL SGDKDILQLV SDKTRAILTK KGITEIEEYN AENVYRKFGV
HPNQITDYKG LTGDPSDNIP GVPGIGPKTA TKLLQDFDSV ENILANLDKI TSRARTLMEN
NSEQALLSKR LATIITNVPV QITLEQCIRT EPNEAELFNI LKKLEFKKLL RDMLTAETGN
SNQIKQKHLI NKQSYAVEYI TLSEQEDFED LLVQAQKSGK VALALQGRRE KGLISVALCL
SEGQNYLLPL NSSTETTSFA LKLLQNICVD SKIKKCCYDT KADLWLLHYY GIEINQPGFD
VMLADYLLNP GKSARSLPET ALSHLDIVLQ EGSETYLPAS AEVISRLVDI LQSKLLLQEQ
ENLYYDIELP LLKVLASMER TGVSVDKEQL QLMSEELNKK LQVLTTDIYE HAGEIFNINS
TKQLGSILFE KLKLKAGKKT KTGYSTDVTV LEELAGDHPV VSLLLEYRQL AKLKSTYVDG
LTGLINPQTG KLHTTFHQAV TATGRLSSSE PNLQNVPIRL DAGRKIRKFF VPCKPDNFIF
SADYSQIELR ILAHIAQDNN LMDAFAKKQD IHTRTASEVF GVAMDEVTPE MRGRAKAVNF
GIVYGISDFG LAKDIKVTRK EAGRYINNYF NRYSGVKAYI DRVIREAREK GYVTTILNRR
RYLPDLFSSN RVVRSFGERT AMNTPIQGSA SDIIKLAMVL IYREMRKRKL SSTMILQVHD
ELIFDVVASE VEEMQNLVKY YMENAVELSV PLVVDMKIGP NWYDVQKI