Gene Dtox_2404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_2404 
Symbol 
ID8429388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp2581225 
End bp2581890 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content35% 
IMG OID645034709 
Productpolysaccharide deacetylase 
Protein accessionYP_003191838 
Protein GI258515616 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.256857 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.336364 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCGATTA TTCCAAATGC AGCTCCTGAA AAACCCATAA ATTTTTCTAG TGAGCATGTT 
ATTTACAGGG TTAATAATAC AGAAAAGTTA GTTGCCATCA CTGTGGATGA CGGGCCTAAT
CCAAAATTCA CACCTAGGTT ATTAGATATT CTTAGGGAAA ATAAGATTCA TGCTACTTTT
TTTGTTGTAG GCAATCAACT GGAAAAATAT CCCGAGCTGG GAAAAAGAAT TTTAAAAGAA
GGTAATGAAG TTGGAAACCA TACTTATACT CACCCCAAAC TATTAAAAAA TAACAGCAGT
GAAATAATTG ATGAAATTGT AAAGTGTAAT GATACTATCG AAAAAGTTTT AGGTATTAAA
ACTAAATATT TTCGTCCGCC TAAAGGCCAA CTAAACCATG ATATTATTAA AGCTGCCCAT
GAACATGGGG AAAAAGTAGT ACTTTGGTCT ATTGCCTTGG AACACCATGA CGCCAATACA
CCTGAAGAAA TGGTTAATAG AATAGTTAAC AATATAACTC CCGGCGGGAT TATCTTAATG
CATGATGGTC GTTTGGATCG AACTAAATCT ATCCAAGCCG TACCTGAATT AATCAAAGAG
TTACAGGATA ACGGCTATAA GTTTGTCACC CTTTCCGAGT TGCTGGAATC CAACAAAACA
ATTTAA
 
Protein sequence
MPIIPNAAPE KPINFSSEHV IYRVNNTEKL VAITVDDGPN PKFTPRLLDI LRENKIHATF 
FVVGNQLEKY PELGKRILKE GNEVGNHTYT HPKLLKNNSS EIIDEIVKCN DTIEKVLGIK
TKYFRPPKGQ LNHDIIKAAH EHGEKVVLWS IALEHHDANT PEEMVNRIVN NITPGGIILM
HDGRLDRTKS IQAVPELIKE LQDNGYKFVT LSELLESNKT I