Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtox_2404 |
Symbol | |
ID | 8429388 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum acetoxidans DSM 771 |
Kingdom | Bacteria |
Replicon accession | NC_013216 |
Strand | + |
Start bp | 2581225 |
End bp | 2581890 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 645034709 |
Product | polysaccharide deacetylase |
Protein accession | YP_003191838 |
Protein GI | 258515616 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.256857 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.336364 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCCGATTA TTCCAAATGC AGCTCCTGAA AAACCCATAA ATTTTTCTAG TGAGCATGTT ATTTACAGGG TTAATAATAC AGAAAAGTTA GTTGCCATCA CTGTGGATGA CGGGCCTAAT CCAAAATTCA CACCTAGGTT ATTAGATATT CTTAGGGAAA ATAAGATTCA TGCTACTTTT TTTGTTGTAG GCAATCAACT GGAAAAATAT CCCGAGCTGG GAAAAAGAAT TTTAAAAGAA GGTAATGAAG TTGGAAACCA TACTTATACT CACCCCAAAC TATTAAAAAA TAACAGCAGT GAAATAATTG ATGAAATTGT AAAGTGTAAT GATACTATCG AAAAAGTTTT AGGTATTAAA ACTAAATATT TTCGTCCGCC TAAAGGCCAA CTAAACCATG ATATTATTAA AGCTGCCCAT GAACATGGGG AAAAAGTAGT ACTTTGGTCT ATTGCCTTGG AACACCATGA CGCCAATACA CCTGAAGAAA TGGTTAATAG AATAGTTAAC AATATAACTC CCGGCGGGAT TATCTTAATG CATGATGGTC GTTTGGATCG AACTAAATCT ATCCAAGCCG TACCTGAATT AATCAAAGAG TTACAGGATA ACGGCTATAA GTTTGTCACC CTTTCCGAGT TGCTGGAATC CAACAAAACA ATTTAA
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Protein sequence | MPIIPNAAPE KPINFSSEHV IYRVNNTEKL VAITVDDGPN PKFTPRLLDI LRENKIHATF FVVGNQLEKY PELGKRILKE GNEVGNHTYT HPKLLKNNSS EIIDEIVKCN DTIEKVLGIK TKYFRPPKGQ LNHDIIKAAH EHGEKVVLWS IALEHHDANT PEEMVNRIVN NITPGGIILM HDGRLDRTKS IQAVPELIKE LQDNGYKFVT LSELLESNKT I
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