| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_2401 |
|---|
| Symbol | thrS |
|---|
| ID | 8429385 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | - |
|---|
| Start bp | 2577046 |
|---|
| End bp | 2578950 |
|---|
| Gene Length | 1905 bp |
|---|
| Protein Length | 634 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 645034706 |
|---|
| Product | threonyl-tRNA synthetase |
|---|
| Protein accession | YP_003191835 |
|---|
| Protein GI | 258515613 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0441] Threonyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.162517 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.284009 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTAAGG TTAGTCTGAA AGATGGTTCA ACCAGGGAGT ATGAGCCAGG TATCACGATT
ATACAAGTAG CTGAAGATAT TAGCCCTGGT TTGGCCAGGT CAGCTTTAGC AGGTAAAATA
AACGGTAAAG CTGTGGATTT AAGCACTGCT CTTGAAGATA ATGTCTCTTT GGAAATTCTT
ACTTTTAATG ACCCGGAAGG ACAGGAGATT TATCGCCACA GCAGCTCGCA TGTGTTGGCA
CAGGCGGTTC AACGCCTGTT TCCCGGAACT AAACTGGCCA TTGGGCCGGC TATTAAAGAT
GGTTTTTATT ATGATTTCGA TTCTGAACAT AAATTTACCC CGGCTGATAT GGAGAAAATT
GAAGCCGAGA TGAATAAGAT TATTAAAGAA AACCAGCCCT TTAAACGCTT TGAGTTGTCC
CGCGCAGAGG CCATAGATAA ATTTACGGAC CTAGATGAAA AATATAAAGT AGAGCTAATT
AATGACTTGC CGGGAGATGC TGTAATTTCC TGCTATGAAC AAGGCGGCTG GTGTGATCTG
TGCGCAGGTC CGCATGTTCC CTCAACAGGC AGCTTGAAGG CAGTCAAACT TACGAGTCTG
GCCGGTGCTT ACTGGCGAGG CAGCGAGAAG AACAAAATGC TGCAGCGGTT TTACGGTACC
TCATTTCCCA AAAAAGCTCT GCTGGATGAG CATATTAACA GGATTGAAGA GGCTAAACGC
AGAGATCACC GTAAGCTGGG CGCTGAATTG GAATTATTCA GTGTAATGGA AGAAGGTCCC
GGGTTCCCGT TTTTTCATCC CAAGGGTATG ATTTTGCGCA ATGAATTAGA AAAATTCTGG
CGACAGGAGC ATGAAAAAAG AGGTTACCAG GAGATACGCA CCCCAATTAT TCTGAACAGA
GTTCTCTGGG AGCAGTCCGG CCACTGGGAT CATTACAAGG AGAATATGTA TTTTACCCAA
ATAGACAATT TTGATTTTGC TGTAAAACCA ATGAACTGTC CCGGAAGTAT GCTGATTTAT
AAATCTAAAT TGCACAGTTA TCGCGAGTTC CCAATCAGGA TGGGGGAACT TGGTTTGGTT
CACCGCCATG AGCTGTCTGG TGTGCTGCAC GGCTTAATGC GGGTAAGGTG CTTTACTCAG
GATGATGCGC ACATCTTTAT GCTGCCGGGG CAGGTTAAGG ACGAGATTAT TGGAGTTATT
GATCTGGTCG ATGATTTCTA CAGTATATTC GGTTTCAAAT ACCATGTGGA GTTGTCTACT
AAACCGGAGA AAGCCATGGG ATCTGATGAA GTCTGGGATA TGGCCACCAA TACTTTAAAA
GAGGCTATTG AAGCAAAAGG TTTGGACTAT AAGGTTAATG AAGGCGATGG GGCCTTTTAC
GGGCCGAAGA TTGATTTTCA TCTGGAAGAT TGTCTGGGAC GTACCTGGCA GTGCGGGACT
ATACAATTGG ACTTTTTAAT GCCGGAAAAA TTCGATTTGA GCTATGTGGG AGAAGATGGC
CAAAAGCACC GCCCGGTAAT GCTGCACAGA GTTGTTTTCG GCAGCATCGA ACGTTTTATA
GGTATTCTGA CCGAGCATTT TGCCGGTGCT TTTCCGACCT GGTTGGCACC CGTTCAGGTC
AGGGTATTGC CCATTACTGA TCGCCAGTCA GATTACGCTG TAAGAGTAGT GGATAGACTG
AAAGAGACCG GTATAAGGGT GGAGCTTGAT CAACGCAATG AAAAGATAGG ATATAAAATA
CGTGAGGCAC AGACCCAAAA AATACCCTAT ATGCTGGTAA TAGGTGATAA AGAGCTGGAA
AAAGAATTGG TAGCTATACG CCACCGCTCA CAGGGTGATT TAGGAATAAG TACGCTGGAG
GACTTCATTG ATAAATTGCA AGAGGAAATA AGGGATAAAA AATGA
|
|---|
| Protein sequence | MIKVSLKDGS TREYEPGITI IQVAEDISPG LARSALAGKI NGKAVDLSTA LEDNVSLEIL
TFNDPEGQEI YRHSSSHVLA QAVQRLFPGT KLAIGPAIKD GFYYDFDSEH KFTPADMEKI
EAEMNKIIKE NQPFKRFELS RAEAIDKFTD LDEKYKVELI NDLPGDAVIS CYEQGGWCDL
CAGPHVPSTG SLKAVKLTSL AGAYWRGSEK NKMLQRFYGT SFPKKALLDE HINRIEEAKR
RDHRKLGAEL ELFSVMEEGP GFPFFHPKGM ILRNELEKFW RQEHEKRGYQ EIRTPIILNR
VLWEQSGHWD HYKENMYFTQ IDNFDFAVKP MNCPGSMLIY KSKLHSYREF PIRMGELGLV
HRHELSGVLH GLMRVRCFTQ DDAHIFMLPG QVKDEIIGVI DLVDDFYSIF GFKYHVELST
KPEKAMGSDE VWDMATNTLK EAIEAKGLDY KVNEGDGAFY GPKIDFHLED CLGRTWQCGT
IQLDFLMPEK FDLSYVGEDG QKHRPVMLHR VVFGSIERFI GILTEHFAGA FPTWLAPVQV
RVLPITDRQS DYAVRVVDRL KETGIRVELD QRNEKIGYKI REAQTQKIPY MLVIGDKELE
KELVAIRHRS QGDLGISTLE DFIDKLQEEI RDKK
|
|---|
| |