Gene Dtox_2252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_2252 
Symbol 
ID8429235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp2424211 
End bp2425047 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content45% 
IMG OID645034559 
Productnicotinate-nucleotide pyrophosphorylase 
Protein accessionYP_003191689 
Protein GI258515467 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0157] Nicotinate-nucleotide pyrophosphorylase 
TIGRFAM ID[TIGR00078] nicotinate-nucleotide pyrophosphorylase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00487275 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACCTGC TATTAGCGGA TAAGATTATT AATGACGCAC TACTGGAAGA CATTGGCAGA 
GGGGATATAA CAACAAAAAC AATAATTGCC GCTGATATGG AGGCACAGGC TGTTTTTATT
TCACGTAATG CCGGTATTGT AGCTGGCTTG GATATTGCGG GCCGGGTATT TGAGAAATTA
GATCCTCACT ACAGCTTGGA AAAAATCATT TCTGACGGTG ACCAGGTACA AGCAGGAGAG
GCTATCGCCC GGGTTTCCGG TAAGGCGCAT GCGTTGTTAT CAGGTGAAAG AGTAGCTTTG
AATTTTCTGC AGCACCTATC CGGTATTGCT ACTGAGACAA GAAATATCGT GGAGATTGTC
AAACCTTTCG GCGTTAGAAT TGCTGATACT CGTAAAACCA CCCCCGGCTT GAGAATGTTC
GAAAAATATG CCGTCACTGT AGGTGGGGGT TATAATCACC GCATGGGACT GGATGATGCT
GTTTTAATAA AAGACAACCA CCTGCAAATT GCCGGCGGTG TCAAACAGGC TGTTGAACTG
GTAAGAAATA AAATTGGTCA TTTAGTTAAG ATAGAGGTGG AAGTTGAGAC ATGGACTCAG
TTGGAAGAGG CTGTTCAGGC AGGCGTGGAT GTTATTATGC TGGATAATAT GAACACGGAA
ACTATGCAAA AAGCCGTCAA GTTTGTTGGT AGAAGAGCTG TAACCGAGGC TTCCGGTCAA
ATCACTGCTG CTAATGCCGG GGCAGTGGCT GCAACCGGAG TAGATGTCCT TTCACTGGGT
TGGATTACAC ACTCCGCCAG GCCGCTGGAT ATAAGCCTGG AGATTGAAAT AATATAA
 
Protein sequence
MNLLLADKII NDALLEDIGR GDITTKTIIA ADMEAQAVFI SRNAGIVAGL DIAGRVFEKL 
DPHYSLEKII SDGDQVQAGE AIARVSGKAH ALLSGERVAL NFLQHLSGIA TETRNIVEIV
KPFGVRIADT RKTTPGLRMF EKYAVTVGGG YNHRMGLDDA VLIKDNHLQI AGGVKQAVEL
VRNKIGHLVK IEVEVETWTQ LEEAVQAGVD VIMLDNMNTE TMQKAVKFVG RRAVTEASGQ
ITAANAGAVA ATGVDVLSLG WITHSARPLD ISLEIEII